Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1152 ATGGGGTTCTTAAACATAGAGAAGAAATGGTTATATCCTTTCGTTCTGTGTTCTGCTATATGCATGCTCGTACTAGTCACATCCTTCAACATGGGTCTTGTCTCTTCAATTCACTCCATCAATTCACTGTTTTTCTTTCTCCCATCTCATTTGCGCTCAAACCATACTGGCCCGGTTTTTGTGGAGAGGACGTCTTCTATTGCTCCAGCACCGGCTAGGCCTGCGATTCCTCGTTTCGCTTATTTAATTTCTGGCTCCAAAGGTGATTTGGAAAAGCTTTGGAGAACTCTCCATGCAATTTATCATCCACTAAACCATTATGTTGTTCATATGGACCTTGAATCGCCGCTAGAGGAAAGGATGGAGATTGCACATAGAATTGAAAGACAACATGTCTTCGCTGAGGTTGGAAACGTTTATGTAGTCACAAAGGCTAACATGGTCACTTACCGAGGACCAACTATGGTTGCTAATACTCTTCATGCTTGTGCCATTCTGCTCAAGAGAAGTAAAGACTGGGATTGGTTTATTAATCTTAGTGCTTCAGACTATCCTCTTGTGACTCAGGATGATCTACTATATACCTTTTCAGGTTTAGATAGAGGACTTAACTTCATTGAGCACACAAGTCGGTTGGGGTGGAAGCTTGATAAAAGAGCAATGCCTTTAATTGTAGACCCGGGGCTTTACATGTCAACCAAATCTGATGTATTTTGGGCCAATCCTAAGAGAACTCTGCCAACAGCATTTAAACTATTCACTGGTTCAGCATGGATGGTTCTATCACATGACTTTGTTGAATATATTGTATGGGGGTGGGACAATCTACCAAGGACCCTTCTCATGTACTACAGTAATTTTCTGTCTTCCCCTGAAGGTTACTTTCAGACTGTTGCATGCAATGTGCCAGAATTAACCAAAACCCTTGTCAATAGTGACTTGCGTTATATTACTTGGGACACCCCTCCTAAACAGCACCCTCACGTCCTTAACATCAATGACACAGACAAAATGATTGGAAGTGGTGCTGCCTTTGCTAGAAAATTTAATCAAGATGATCCAGCCTTGGATTTGATTGATCAAAAATTTCTCCGGAGGAGAAATGGACTATTCCCGCTCGGTGGTTGGTGCACCGGCAAACCCAAATGTTCTGAGGTTGGAAACATTTATAAACTCAGACCTGGTCAAGGAGCTCAAAGGCTTCATCGCCTTGTCACAGGCTTAACTTTGAAGGCTAAATCTGGTAAGAATCGGTGTAAATAG 1263 0.422 MGFLNIEKKWLYPFVLCSAICMLVLVTSFNMGLVSSIHSINSLFFFLPSHLRSNHTGPVFVERTSSIAPAPARPAIPRFAYLISGSKGDLEKLWRTLHAIYHPLNHYVVHMDLESPLEERMEIAHRIERQHVFAEVGNVYVVTKANMVTYRGPTMVANTLHACAILLKRSKDWDWFINLSASDYPLVTQDDLLYTFSGLDRGLNFIEHTSRLGWKLDKRAMPLIVDPGLYMSTKSDVFWANPKRTLPTAFKLFTGSAWMVLSHDFVEYIVWGWDNLPRTLLMYYSNFLSSPEGYFQTVACNVPELTKTLVNSDLRYITWDTPPKQHPHVLNINDTDKMIGSGAAFARKFNQDDPALDLIDQKFLRRRNGLFPLGGWCTGKPKCSEVGNIYKLRPGQGAQRLHRLVTGLTLKAKSGKNRCK 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1152 420 Pfam Core-2/I-Branching enzyme 79 338 IPR003406 GO:0016020|GO:0016757
Ssu8g1152 420 PANTHER GLYCOSYLTRANSFERASE 4 420 IPR044610 GO:0015020
Ssu8g1152 420 PANTHER OS01G0201100 PROTEIN 4 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1152 Ssu-Chr8 20480710 20482993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1152 1 420 Glycosyltransferase AT3G15350 64.789 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1152 - - gmx:100776045 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1152 8 20480710 20482993 Ssu8g1152 8 20480710 20482993 ECH