Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1149 ATGACTGGAGTGTCATTGGGTGTGCGCACAGGGAGCTATGGGTCGCTGCAAAACGGCAACGTTTTGCCCATTCTTGTGCGTAGACCTTCAAAGGCGCTCCTCCACAACcccagagagaaagagaggggtTTCCCTTTCATTTGCCGGCTCCTTGGGCGAGGGAAGGTCGCAATGCTCCTCATGCTTGGCCTTGGCCTTTGTCTCTTCGTTTTTGGTTGCTTTACTGTTTACAAAGGTGGAAACATCACTAGTGAAATTGAAGATACGCGATCTTATGCCATTACTAGGTATGGAATTTTAAGACCTCGTGGAGTAGTAGAAGATAAGACACAGTATAGTAATTCTTCTAGAATGACCTCATTGACAAGTAGACATAGAAGTACAGCTAGGCCTCCTCCTGCTCCTCATTCCCTGTCCTCGTCCAAGTCTAAAGGCAAGAAGGGGCATTTTCCTATTTGGGGACATCAATGTGACCATTTTGCATTTCCTCCACCACCAGCTGATAGAAGACGAACTGGACCACGGCCATGCCCTGTGTGTTATCTTCCAGTGGAGCAAGCTATAGCTAGTATGCCAAGTTCCCCATCAGAATCTCCCATACTTCGCACTTTGACATATGTACATGATAAAAATCCAATTGAAAGGGAACCGCATGGTGGTTCTGATTTTGGTGGATACCCTTCTCTAGAAGAAAGGGATGCTGCTTTTGATATAAAAGAGACTATGTCAGTGCATTGTGGATTTGTCAAAGGAAGTAGACCTGGTTACCGGACAGGATTTGATTTTGACGAGGCAGATCTCTTAGAGTTGGATCAGTATCATGATGTCATTGTTGCATCTGCCATATTTGGAAACTATGATGTTATACAGCAGCCCAGGAACATCAGTTCAGAAGCAAAGAAAAACATTCCTTTCTATATGTTCATTGATGAAGAAACAGAAATGTTTATGAAGAATGCTAGTATTTTGAGTAGCAGCATGAGAGTTGGATTATGGAGAATCATTGTTGTCCATAATGTTCCTTATGCTGATGCTCGGCGTAACGGAAAGGTTCCAAAGCTTCTTTTACACAGGATCTTCCCCAATGTACGATATTCGATATGGATTGATGGGAAGCTTGAGCTTGTTGTGGACCCGTATCAAATTCTTGAAAGGTTCTTGTGGCGCTCAAATGCAACTTTTGCAATTTCAAGACATTATAGACGCTTTGATGTATTTGTTGAGGCTGAGGCTAATAAAGCTGCTGGGAAATATGAAAATGCTTCCATTGATGACcagattcaattttataaataccaCGATGGTTTAACTCATTATTCCAGGAATAAGCTTCCTATAACTAGTGATGTTCCTGAAGGTTGTGTTATCATAAGAGAACACATTCCAATTACAAATCTCTTTACTTGCTTATGGTTCAATGAAGTTGATCGCTTCACTTCCAGGGATCAGTTAAGTTTTTCCAcagtaagagataaaataatggCAAAAGCTGATTGGAGTATTAACATGTTTATGGATTGTGAAAGACGTAACTTCGTGATACAGGCTTACCATAGAGACGTATTGGAGCACATGCCTCCTCCAGTTGTTGTAACCCGGCGTCCTGGTCCACCTGCTTATACCAATAGGCCTCACATGAGGAATCATCCTAGGCGTGGGAGAGGAGACAAGAGATCAGGTTCAAAGCGTCGTCATAGAGTAGTAGGCAGTGTTATGAACCACATTTTGATTTAG 1734 0.4112 MTGVSLGVRTGSYGSLQNGNVLPILVRRPSKALLHNPREKERGFPFICRLLGRGKVAMLLMLGLGLCLFVFGCFTVYKGGNITSEIEDTRSYAITRYGILRPRGVVEDKTQYSNSSRMTSLTSRHRSTARPPPAPHSLSSSKSKGKKGHFPIWGHQCDHFAFPPPPADRRRTGPRPCPVCYLPVEQAIASMPSSPSESPILRTLTYVHDKNPIEREPHGGSDFGGYPSLEERDAAFDIKETMSVHCGFVKGSRPGYRTGFDFDEADLLELDQYHDVIVASAIFGNYDVIQQPRNISSEAKKNIPFYMFIDEETEMFMKNASILSSSMRVGLWRIIVVHNVPYADARRNGKVPKLLLHRIFPNVRYSIWIDGKLELVVDPYQILERFLWRSNATFAISRHYRRFDVFVEAEANKAAGKYENASIDDQIQFYKYHDGLTHYSRNKLPITSDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQLSFSTVRDKIMAKADWSINMFMDCERRNFVIQAYHRDVLEHMPPPVVVTRRPGPPAYTNRPHMRNHPRRGRGDKRSGSKRRHRVVGSVMNHILI 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1149 577 MobiDBLite consensus disorder prediction 108 141 - -
Ssu8g1149 577 MobiDBLite consensus disorder prediction 528 566 - -
Ssu8g1149 577 PANTHER DUF616 FAMILY PROTEIN 20 572 - -
Ssu8g1149 577 MobiDBLite consensus disorder prediction 108 147 - -
Ssu8g1149 577 MobiDBLite consensus disorder prediction 545 566 - -
Ssu8g1149 577 PANTHER ALKALINE CERAMIDASE-RELATED 20 572 IPR006852 -
Ssu8g1149 577 Pfam Protein of unknown function (DUF616) 204 518 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1149 Ssu-Chr8 20403130 20412158 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1149 - - gmx:100810247 977.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1149 8 20403130 20412158 Ssu8g1149 8 20403130 20412158 ECH