Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1144 ATGAATTTTCTTCTCTccatcctctttcttcttttcactCTCTTCTCCTGCAACCCTGTCTCCTCCTTTGCCTCACAACCTTCTTACAAAGACCACTGTGCTTCCATAGTCCTAGACTCAACTCCCACCACCAAACTCATCAACCATTTCCCTCTTGGTGACCATCACACTGGTTACTACATAGGAGGTGATAGCATCATCGATGCTGACGCTTCTTGGAACCGCTTCTCCTTTTACCTCTCACGGAGGGACACACGTGCAACTCAAACCCCAAACCTTTTCAAAGTTGCAGGCACTATATCATTTAGGAGCACCAACACATTCAGTGATGGTGACGGTTCATATTATAGGCGTCAACGTCGTTACCGTAGAGGTTACGTGACCTTCAAGCTTGATGGGTTTTGGCATGAATCTTCAGGGAAGGTTTGCATGGTTGGGACAAGTAGTGGTTATTCCAAAACAGGTAACACTCTTAATGTGAATGCTATTTTTAAGCTTAATAATGTGTTCAATGCAAGTAATATCACTAACTTGGTTAGTGGAAGCTTGGAGAGCTTGAGTTCTGAAAAGGATGATAGCTACTTTGAACCCATTACTGTGTTGATGTTTCCAAAAGCAAATTACAATTATACCATGGATACCATAGAAGTTGACAAGGAGTTCTCTTCTGGGAGTGATGCTGAGCAGGGGTTAGCATTGAATTTAGATTCATTTAGTTTTTGCAAGTCTCCCCTCTCTTGGGGGATTGGAAGACTCCAACTGGAGTACTCTCTTGAGTGCCATTCTTCTAAGAATTGCATTCCTATAAATAGGAGTTCTGGTCAACTTCCATCTCTAATGTCTTTGACAGGCATTGGATGTTCTCTTGCTACTAAGAAACATAGGTTGAGGGTTCTGGTGGAATTTTCAGATATTGGTTATCGTTCGATTAACCATAGTTTTGATCCCAAAACTATGTTAGTAGGGGAAGGATGGTGGGATGAGAAGAAGAACATGTTGTGTGTAGTGGCTTGCCATATCATGGGCAATTCATCATCCTTGGCTGGCACTCATGTGGGTGATTGCTCAGTAAGACTAAGATTGAGATTCCCCTCAATTTGGTCAATAAAGAACACTAGTAGCATAGTGGGCCAAATTTGGAGCAACAAGAGTGCAAGTGATCCAGGATATTTCAAGATGGCAACATTTAGAAATGATGAGGATCGCGGGGTGAGAGGTCATGGCTTAAAGTATGAGTATAGCGAGCTAGAAAAGGTTAACCAATCCTGCCCAAGACACAAGCCTAATGACAAGGGGAAAAGATATCCAGAGGCCTATTCTTATGACATGAGATTTGATATGTCACTTAGAGAGTCCAACAAAAGAGTAGCATGGGGTTATTCAGAACCCTTAGCTGTTGATGATCAATTCTATGAGTTGGGCCTATATACATCTTCTGATTCTTTCTCAAGTTTCTCAAATGAAGTTCCTGATGAAaccctcaacaacaacaatggtaGCTTGTTTAACATGAGCTACAAGATTAGCATCTCAGGGATGTCTTTATCAAAGTTAGGTGACAGGAATTCTGTGTTTAATTTGTCCTCTCAGAGTGTGAAGATCTCAGCAGAAGGAGTTTATGATGCTGGAGCAGGAACCTTGTGTATGGTAGGTTGCCGTGAACTTCTCTCAAACACAAACACTGAGACACCAGTAGCTCATTCTGTGGACTGTGATGTTTTACTGAAGTTTCAGTTCCCATCATTGGACACAAATGCTGGAAGCTACATTAAGGGAAGTATTGAAAGCACGCGTAAAGAATCTGATCCTCTTTACTTCAAGCGTTTAGACCTATCTGCGGTTGCATATTACAGGGAAGCAGCAAGAAGAAATGTTTGGAGAATGGATATGGAAGTCATCATGGCTCTGATATCTACAACTCTAGCATGTGTTTTTGTGGGATTGCAACTCTACAAGGTGAAGAGAGAACCGAATGTGCTGCCCTTCATCTCACTTATTATGATGTCAATTCTTACTTTTGGTCACATGATACCCCTTGTTCTGAACTTTGAAGCTCTTCTCACTCAAAATCCCGACAACAAGAACTGGGTGTTTAGAAATAATGGATGGCTTGAAGTTAATGAAATAAGTGTGAGGCTGATCACCATGGTGGCTTTCTTGTTGCAATTCCGTCTCCTGTATCTGACTTGGTCAGCAAGAAAGAGTGATGAAAGCAAGAAAGGCCTATGGATTGCTGAGAGGAACAGTGCTTATGTCACTTTACCTTTGTATGCTGCAGGGTTATTGATTGCTTTGCTGTTGAAATTGAAGAAGAATGGAGATAAGGATCTTATGTATACCCCTATGTACCAGCCTTCATTTTGGGAGAACATCAAATCTTATGGTGGTTTGGTTTTGGATGGTTTTCTCTTGCCACAAATCATTCTAAACCTGTTTTCAAATATGAGGGACAATGTTCTTTCATGTTCATTTTACTTTGGAACTACTTTTGTGAGACTGTTGCCCCATGCCTATGATCTTTACAGGACTCATAATTTTGCTCGCTTAGATAATGGATCATACTTCTATGCAGATCCAAGTGCAGATTTTTACTCCACCGCTTGGGACATTGTCATTCCATTGGGAGGTGTCATGTTTGCTATCATTATCTACTTGCAGCAACGTTTTGGTGCTCATTGTATTCTGCCTCAAAGATTCAAAGGGTATAATGTATATGAAAAGGTGCCTGTGGTTACTGAATCAGAAGCTGAAGTAGAGACTACCAACTTGTAA 2772 0.4051 MNFLLSILFLLFTLFSCNPVSSFASQPSYKDHCASIVLDSTPTTKLINHFPLGDHHTGYYIGGDSIIDADASWNRFSFYLSRRDTRATQTPNLFKVAGTISFRSTNTFSDGDGSYYRRQRRYRRGYVTFKLDGFWHESSGKVCMVGTSSGYSKTGNTLNVNAIFKLNNVFNASNITNLVSGSLESLSSEKDDSYFEPITVLMFPKANYNYTMDTIEVDKEFSSGSDAEQGLALNLDSFSFCKSPLSWGIGRLQLEYSLECHSSKNCIPINRSSGQLPSLMSLTGIGCSLATKKHRLRVLVEFSDIGYRSINHSFDPKTMLVGEGWWDEKKNMLCVVACHIMGNSSSLAGTHVGDCSVRLRLRFPSIWSIKNTSSIVGQIWSNKSASDPGYFKMATFRNDEDRGVRGHGLKYEYSELEKVNQSCPRHKPNDKGKRYPEAYSYDMRFDMSLRESNKRVAWGYSEPLAVDDQFYELGLYTSSDSFSSFSNEVPDETLNNNNGSLFNMSYKISISGMSLSKLGDRNSVFNLSSQSVKISAEGVYDAGAGTLCMVGCRELLSNTNTETPVAHSVDCDVLLKFQFPSLDTNAGSYIKGSIESTRKESDPLYFKRLDLSAVAYYREAARRNVWRMDMEVIMALISTTLACVFVGLQLYKVKREPNVLPFISLIMMSILTFGHMIPLVLNFEALLTQNPDNKNWVFRNNGWLEVNEISVRLITMVAFLLQFRLLYLTWSARKSDESKKGLWIAERNSAYVTLPLYAAGLLIALLLKLKKNGDKDLMYTPMYQPSFWENIKSYGGLVLDGFLLPQIILNLFSNMRDNVLSCSFYFGTTFVRLLPHAYDLYRTHNFARLDNGSYFYADPSADFYSTAWDIVIPLGGVMFAIIIYLQQRFGAHCILPQRFKGYNVYEKVPVVTESEAEVETTNL 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1144 923 Pfam Protein of unknown function (DUF2921) 30 895 IPR021319 -
Ssu8g1144 923 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 1 920 IPR021319 -
Ssu8g1144 923 PANTHER DUF2921 FAMILY PROTEIN 1 920 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1144 Ssu-Chr8 20325434 20334169 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1144 - - gmx:102660202 1483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1144 8 20325434 20334169 Ssu8g1144 8 20325434 20334169 ECH