Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1141 ATGCTTTCCATGACCATGGAAGAACAAGAACCAAAGCTGATCGAGCATGGCTCCAAAGAGAAGCATAACAAGGACATGCACATGCACAATCTCAATCCCAACCCATCTCAAGCAATCATGAGATTGGCTTCACTTGCCATCAGCTTCAACGTGCGGTTGAAATCATCCGACATGCCTGTCCACATGCAGGAACATGCTCTGCGCCACACTAGATCGCTCATCCCCCTTCACCCTCCTTCTCCAAAGCCAACAAACACTCACATAGCTAGAGCTCTCAAAAAGGAGTTTGACTCGAAGTATGGACTAGCGTGGCACTGCGTGATAGGGAAGAGTTTCGGGTCGTTTGTGAGTCACACGGGTGGCGGGTTCATATACTTCTCAATTGACTCACTTTCGGTTCTTCTCTTCAAAACTGAGGTTCACTTGGTCACGCAACCGCCTcctccttaa 450 0.4778 MLSMTMEEQEPKLIEHGSKEKHNKDMHMHNLNPNPSQAIMRLASLAISFNVRLKSSDMPVHMQEHALRHTRSLIPLHPPSPKPTNTHIARALKKEFDSKYGLAWHCVIGKSFGSFVSHTGGGFIYFSIDSLSVLLFKTEVHLVTQPPPP 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1141 149 MobiDBLite consensus disorder prediction 9 27 - -
Ssu8g1141 149 Pfam Dynein light chain type 1 51 138 IPR001372 GO:0007017|GO:0030286
Ssu8g1141 149 SUPERFAMILY DLC 48 138 IPR037177 GO:0007017|GO:0030286
Ssu8g1141 149 SMART Dynein_light_2 46 138 IPR001372 GO:0007017|GO:0030286
Ssu8g1141 149 MobiDBLite consensus disorder prediction 1 27 - -
Ssu8g1141 149 PANTHER DYNEIN LIGHT CHAIN 24 145 - -
Ssu8g1141 149 PANTHER DYNEIN LIGHT CHAIN 24 145 IPR001372 GO:0007017|GO:0030286
Ssu8g1141 149 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 43 138 IPR037177 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1141 Ssu-Chr8 20304141 20304741 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1141 K10418 - gmx:100790593 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1141 8 20304141 20304741 Ssu8g1141 8 20304141 20304741 ECH