Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1120 ATGGCAGTGAGCTTTCTGAAGCGCGAGGTATCGGACCTCTGCCTTGGGAAGCCGCCGCTGAGGTCGCTGTCCGCCGCCGCCACCGTCGCCGACGCCTTGGCCGCGCTGAAGAGCTCCGACGACAGCTTCATCAGCGTGTGGGGCTGCGACCACCGCGAGAACGAGGAAGAAGTGAAGGGCGGTCGTTGCAGATGCTTGGGGAAACTCTGCACGGTCGATGTTATTTGCTACCTTTGCAGAGAGGACAACCTCTTGTCTCCTTCCTCTGCTCTCAACCAACCCCTTTCTTCTGTTCTAACTAAGGATCCCTCTCTCGTTGTGCATCTCCAACCTTCTTCTAGCCTGTTGGAAGCTATTGATCTCATACTCCAAGGGGCACAGAATCTTGTGGTGCCAATATTGCCAACAAAGAGGAGTGGAGTTTCAAGAAGGAAACAGCATCAGAGAGCTTCATCAACTATCAACAGCCACAATGGTCGTGAGTTCTGCTGGTTGACTCAAGAGGATGTGATTCGGTTCCTGCTTGGTTCCATTGGCCTCTTCACTCCACTTCCTGCTTTATCTATTGACTCTCTTGGGATCATTAGCTCAGATGTGCTTGCCATTGACTACTACTCCCCTGCATCTTCTGCAGTGGGAGCCATCTCAAAGTCCCTCACCCAACAAACTTCTGTTGCCATTGTGGACAGTGATGGGACTTTCATTGGGGAGATATCACCCTTCACCCTCGCTTGTTGCGATGAGACCGTTGCGGCGGCCATCGCCACCTTGTCTGCAGGGGACTTGATGGCCTACATTGATTGTGGAGGCCCTCCTGAGGATCTTGTGAGAGTGGTGAAGGCAAGGTTGAAGGAGAAGAATTTGGAGAAAATGCTGCAAGAATTTACTGTTTTGTCATCTTTGATGGGTGATAATACATCAGCATCCTCTTCATCTTCCTCTGATGAGGAGTCACCAACAAGGACATTGACTAGGTCTGGAAGGTATACTAGGTCATCTAGCTACTCTGCCAGGATGGTGAGGAAGGCTGAGGCTATAGTGTGTCATCCCAAGAGCTCCTTGGTTGCTGTGATGATCCAGGCCATTGCTCATAGAGTGAACTACTTGTGGGTTATTGAGGATGATTGTAGCTTAGTTGGCATTGCTACTTTTTCTAATATGTTGAAGGTGTTCAGAGAACATTTAGAGACTATGTAG 1197 0.5004 MAVSFLKREVSDLCLGKPPLRSLSAAATVADALAALKSSDDSFISVWGCDHRENEEEVKGGRCRCLGKLCTVDVICYLCREDNLLSPSSALNQPLSSVLTKDPSLVVHLQPSSSLLEAIDLILQGAQNLVVPILPTKRSGVSRRKQHQRASSTINSHNGREFCWLTQEDVIRFLLGSIGLFTPLPALSIDSLGIISSDVLAIDYYSPASSAVGAISKSLTQQTSVAIVDSDGTFIGEISPFTLACCDETVAAAIATLSAGDLMAYIDCGGPPEDLVRVVKARLKEKNLEKMLQEFTVLSSLMGDNTSASSSSSSDEESPTRTLTRSGRYTRSSSYSARMVRKAEAIVCHPKSSLVAVMIQAIAHRVNYLWVIEDDCSLVGIATFSNMLKVFREHLETM 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1120 398 MobiDBLite consensus disorder prediction 304 329 - -
Ssu8g1120 398 SUPERFAMILY CBS-domain pair 4 176 IPR046342 -
Ssu8g1120 398 PANTHER CYSTATHIONINE BETA-SYNTHASE (CBS) FAMILY PROTEIN-RELATED 1 398 - -
Ssu8g1120 398 Gene3D - 187 393 IPR046342 -
Ssu8g1120 398 ProSiteProfiles CBS domain profile. 339 397 IPR000644 -
Ssu8g1120 398 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 1 398 - -
Ssu8g1120 398 SUPERFAMILY CBS-domain pair 184 396 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1120 Ssu-Chr8 19932068 19934463 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1120 - - gmx:100783195 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1120 8 19932068 19934463 Ssu8g1120 8 19932068 19934463 ECH