Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1118 ATGTTGGCCATTTTCCACAAGGCTTTTGCTCATCCACCTGAAGAGCTGAATAGTCCTGCATCTTACAAAGGTTCCAAGAAGCCTAAGGTTCCGGAGGAAACTCTCAAAGATTTCCTTTCCCATCATCCTCACAACACTTGCTCTATGAGCTTTGGTCATGCTGCTGTGCTAGCTTATGTCCGCCCTGATCAGCCTTTCTCTATTCATCAAAGGTTGTTTTGTGGGGTTGATGACATATACTGTCTCTTCTTGGGGAGCTTGAACAATTTGTCCTTACTCAACAAGCAATATGGTTTGTCAAAGAGCACTGATGAGGCCATGTTTGTGATTGAAGCTTATAAGACACTCCGTGACCGTGGTCCTTACCCGGCAGATCAAGTTGTCAAGGACCTTGATGGCAGCTTTGCCTTTGTTGTCTATGACAGCAAGGTTGGCAGTGTCTTTGCAGCACTGGGTTCTGATGGAGGAGTGAAGTTGTATTGGGGTATTGCTGCTGATGGATCTGTGGTAATCTCTGATGATCTACAAGTCATAAAAGAGGGATGTGCCAAATCCTTTGCTCCCTTCCCAACAGGGTGTTTGTTTCACAGTGAAGGAGGTCTGATGAGCTTTGAGCATCCaatgaacaaactgaaggcaaTGCCAAGGGTGGACAGTGAAGGGGCCATGTGTGGGGCCAACTTCAAAGTTGATAAGTTCGCCAGAGTCAACAGCATTCCTCGAGTGGGAAGTCAATCCAATTGGATGGAATGGGACCaacattaa 765 0.451 MLAIFHKAFAHPPEELNSPASYKGSKKPKVPEETLKDFLSHHPHNTCSMSFGHAAVLAYVRPDQPFSIHQRLFCGVDDIYCLFLGSLNNLSLLNKQYGLSKSTDEAMFVIEAYKTLRDRGPYPADQVVKDLDGSFAFVVYDSKVGSVFAALGSDGGVKLYWGIAADGSVVISDDLQVIKEGCAKSFAPFPTGCLFHSEGGLMSFEHPMNKLKAMPRVDSEGAMCGANFKVDKFARVNSIPRVGSQSNWMEWDQH 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1118 254 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 31 204 IPR029055 -
Ssu8g1118 254 PANTHER ALUMINUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS 1 249 IPR044828 -
Ssu8g1118 254 PANTHER BNAA08G14100D PROTEIN 1 249 - -
Ssu8g1118 254 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 49 197 IPR029055 -
Ssu8g1118 254 Pfam Aluminium induced protein 2 230 IPR024286 -
Ssu8g1118 254 SMART DUF3700_2 2 230 IPR024286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1118 Ssu-Chr8 19857548 19859050 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1118 - - gmx:547601 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1118 8 19857548 19859050 Ssu8g1118 8 19857548 19859050 ECH