Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1114 ATGGCTTCGAAACTGTTACTCATCGCTGTCTTTGTTCTAGACGTGATTGCTTTTGGACTGGCCGTGGCTGCTGAGCAGAGAAGAAGCACTGCTAGGATTGTGCAGGACAAGGAAGTGAATTATAATTACTGTGTCTATAACTCTGATATAGCAACTGGCTATGGTGTTGGAGCATTTTTGTTCCTCATGGTTAGTCAAGTCCTAATAATGGTGGCAAGTCGATGCTTCTGTTGCGGGAAGCCTCTAAGCCCTGGAGGCTCAAGGGCCTGTGCAGTTGTCCTTTTCATAATCTGCTGGGTGTTTTTTGTCATAGCTGAGGTATGCCTGTTGGCCGGATCAGTGGAAAATGCCTATCACACCAAGTACAGGACCCTCTTCGTGGAAAATCCCCCTTCTTGCGAAATGGTTAGGAAGGGAGTCTTTGCTGCTGGTGctgctttcattttcttcactGCCATAGTTTCTGAATTCTACTATATCAACTACTCAAGCGCCAGGGAAAGCTTCCAACCTTATGCTGGCGGCGAGACTGGTGTAGGTATGGGAACCTACAAATGA 558 0.4552 MASKLLLIAVFVLDVIAFGLAVAAEQRRSTARIVQDKEVNYNYCVYNSDIATGYGVGAFLFLMVSQVLIMVASRCFCCGKPLSPGGSRACAVVLFIICWVFFVIAEVCLLAGSVENAYHTKYRTLFVENPPSCEMVRKGVFAAGAAFIFFTAIVSEFYYINYSSARESFQPYAGGETGVGMGTYK 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1114 185 Pfam Protein of unknown function (DUF1218) 58 153 IPR009606 -
Ssu8g1114 185 PANTHER - 1 185 - -
Ssu8g1114 185 PANTHER OS07G0462200 PROTEIN-RELATED 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1114 Ssu-Chr8 19762571 19764491 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1114 - - gmx:100305647 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1114 8 19762571 19764491 Ssu8g1114 8 19762571 19764491 ECH