Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1113 ATGGATCCAAACACTCGTCTTGATCATGCCCTCTTTCAGCTCACTCCAACCAGAACCAGATGTGACATTGTCATTGTTGGTGGGGGTGTGAGTGAAAGACTGGCTTCTGGGCTGTTAGAACCGTTTCTTTCTCACCTTAAGAGTGCCAAGGATCAGATTTCCAAAGGTGGCTATTCCATCACTCTGCGTCCACCTGCTGCTGCACATGCTCCCTGGTTCACCAAAGCCACCCTCCAaagGTTTGTTAGATTTGTAAGCACTCCGGAAGTTCTGGAGAGGTTTGTGACAATAGAAAAGGAGATTGTGCAGATTGAAGGGTCGATTCAGTCAAGTGAGAGGAGCAATTTGGTGGCAGAAGCAGAAGATGGGCGTGTCAAAAGGTCAACAACTTCCTCTAAGCTGAAAGATGAACCAGCTGGAACCAATCAAGATGGATATGAAGAAAACTCCAGGGTTCGCCTTCAACGTGTTCTAGATAATCGTAAAGCTATGCTTTGCAAAGAACAAGCAATGGCCTATGCCCGTGCTTTAGTTGCAGGATTTTACCCAGAATCTGTGGATGATCTTATATGTTTTGGTGATGCATTTGGAGCTTCACGTTTAAGGGAAGCATGCATAAATTTCTTAGACCTGTGCAAACAAAAGAACGAAGACAAGCTCTGGATAGATGAGATAGCAGCCATGCAGGCATCCGCTCAGCCCGAATTGCCATACTTGAGGACAACTGGAATCATACTTGCTGGTGAAGATGATACAAGCAGTAAACTAAATGGCATAGTTGATGCCTCAATTTCTGAGTCAACACCAAGTCATGCTAGTTTGGACATAGGCCAAGATTATAGCTTGCCGACATCAGGTCAAACACCATCAACAGATGGAAGAGCTCAAATACCAATGTCCTGGCCAAACCATCTTCCTCAGTACATTCACAACTTTCAGGGTCACGCATTTCAACAAATGCCCCCATACCAAGGGTACCTCTATCCTGGTATGCAGGTTCCTTCATATTATCCAGGGAATGTGCAATGGCCTCCAAATGTGGAAGACTCTCATATTGTTCATGACGGAGACAAGGATTATCATAAATCATcgaataagaagaagaagaagaagaaacattcTCAAGTACTGGAGCAGTCTGAAGAAGATAGCTCAACAGCATCCTCTGACTCTAGTTATGAGAGTGATTCAGATGACCATTCACGGCAAGGTAAAAAGCACTCTTCAACAGAAAATCTGCACAAAAAGAAGCATGGAAAGAAGTCCTCAAGGAAAGTAGTTATACgcaatataaactatataaccTCAAATGGAGATGGTGAGAAGGGTAGTGTCACAGAGGGGAGTTTGTCCAATGAGGAAGAATTTATCAATGGAGATTCCCTGAAACAGCAGGTAGAGGAAGCTGTAGGATCACTGGAGAGAAGACATAAGTCAAGCTCGCGTCACCATAAGAAACACCATAGTGCAAAGCACTCTGGCGTGCTAGATGGTTCAACTGATGCTGATTCCAATGGCGTAAAAGGCAATAACAACTGGGATGCTTTCCAAAACCTTCTTTTGAGAGATGATGATTCTACTCTTGATACAGAAAAACAGCCTGTGAAGTTTCAGGAGGAATATATTGTCAATCAGAATTTTGAGAATGGAAGGTCAAATGATATTAACCACGAACCAGACATTAGTAAAACTCGAGTAGTTTCAAATGATTCCTTTGTTATGACAGCAAGGGAATTCAACAGTGGGAATCAAAATCGTGTTGATAACTTTAAGAATGGAATGGATGCACCTTCattgatgaagaaaaataatggcaCAAATGAGGAGATGTTGTTTTCTCGGAGAAATGACGAATCAGGTAGCTATTCTATGTCCACTATGTCTAGCAATGGCCTAGAATCTTCTCTCACTAAATGCCAGAAAGAAGAGGATTGGTTCATAATCAATCAAGCTGATAAACCAGGAAATGAGGATCAAAACCGAGATTTCAGCATGTTTAATGGCATTTCTGTTTCATCATCTCCTGCTGATTCTTTTCATGTagagaaaaacaagaaagacATTATGACTGATGACTCTTTCATGATTCAAGGTCGATCATCAGAAGATCAATTCAATTCTCAGTCAGCAGCTGATCTAAGTTTGGTTTCAGACATTGTTGGGGCTACTGAATTCATGAACAGCACACAAGAAGGTTCACACAATAAGACTGAAACCTTAAATTTCCATGAGCCAGATGATCTCTTCATGGTTCTCGATCGTGATTCAGCTGCAGAGCAAAGTCCAGCACCATGGAGCATAGAAATGGATTATGAGAATAACATTTCTTCTAATGAAGCTAATAGAAAGCTTTCTGAGgttgaaatagataaaaatcatCCATCTAATCAAGAGGATACTGATACAAAAACTCCTGGAGTGCAAAATGGTAAAGTTTCAAGTAAAGAGACAAAGTCTAAGGCTCTAAATGGATCTCTTGGGAAAAGCAAATCTGATATCACGTCAAGAAGCAAAGCATCTCCTGGAAGCAGAACTAGAGTTATAAAGAACAAATCTGAGAAGgaagaggaaaataaaaagagaaaggaggACTTGATGATTCAGCGGCAGAAAAGAATTGCTGAAAGAAGTGCCTCTAAGAAGACTGGAACCGAAACTAAGACTTCCTTGACTTCTGCAAAGAAAGGGAATCCTAAGATACATCCATCCAATGAGGAGACTAAGAAATTGAACAAGCCAGTCCTCAGGAATTCCACCATTGAACGCCTTGCAACTGCCCGCATAAGTCAGCAGAAGGTTTCACCAAGTCAAGCAAAATCAGGTCCAACCAAGAAACCATCCTTGAAGGCAAATGGGGTGCCTTTGCAGAAGACTACTGGCACGGAAAAGAAGAAGCAGGGCGCAAAAGAAGTCAAATCTTCAAGTCATAAAGAAGACGCGAAGAAAACAAATGGGGAAGTTCTTGCTGCCACTAATGGCCAGGCTAAGAATGAAATGGAAGCCTCAATAGCATTGCCAATGAACAATGGTGCCGTGCAATCTGCTGAACCAAATAACAGTAATCTTGGTTCGAAAGACAATGGAGGGTTATCCAAGACATCATCCGAGAAATGTGCAACATATTTGATTTCAGAAAGAGAGCAAGTGCATGGAAATGTTGGCCAGCTTCATGCGGACTCATCTTTGCCAAATCATGATCACGCATTGGGAGGAAATCAGTCAAGAGGTGAAGAAGTATTGCACAAGTTATCTTCAGTTCCTGCTGATAACAAAACTCAACATATTACTGATGTGATCACAAATCCTACAGCTGCATTACCTAGCAATCCCCTAGCAGTTTCTGCTATGAATTCAAAGGTTAATCAAGAAATATATGAAAGTAATGCTGTCTTCCCTAAAGTCACTGAGAAACAATTTTCTACCCCTCCACCCAGTAACCAAGTGATGCCAGAACCAGTTCACTCCAGGAAGAAATGGAACAGTGATGAGGACTCTTCAAAACCAGCAAAAGGATTTCGTAAGCTTCTGTTCTTTGGAAGGAAGAGCTGA 3549 0.4041 MDPNTRLDHALFQLTPTRTRCDIVIVGGGVSERLASGLLEPFLSHLKSAKDQISKGGYSITLRPPAAAHAPWFTKATLQRFVRFVSTPEVLERFVTIEKEIVQIEGSIQSSERSNLVAEAEDGRVKRSTTSSKLKDEPAGTNQDGYEENSRVRLQRVLDNRKAMLCKEQAMAYARALVAGFYPESVDDLICFGDAFGASRLREACINFLDLCKQKNEDKLWIDEIAAMQASAQPELPYLRTTGIILAGEDDTSSKLNGIVDASISESTPSHASLDIGQDYSLPTSGQTPSTDGRAQIPMSWPNHLPQYIHNFQGHAFQQMPPYQGYLYPGMQVPSYYPGNVQWPPNVEDSHIVHDGDKDYHKSSNKKKKKKKHSQVLEQSEEDSSTASSDSSYESDSDDHSRQGKKHSSTENLHKKKHGKKSSRKVVIRNINYITSNGDGEKGSVTEGSLSNEEEFINGDSLKQQVEEAVGSLERRHKSSSRHHKKHHSAKHSGVLDGSTDADSNGVKGNNNWDAFQNLLLRDDDSTLDTEKQPVKFQEEYIVNQNFENGRSNDINHEPDISKTRVVSNDSFVMTAREFNSGNQNRVDNFKNGMDAPSLMKKNNGTNEEMLFSRRNDESGSYSMSTMSSNGLESSLTKCQKEEDWFIINQADKPGNEDQNRDFSMFNGISVSSSPADSFHVEKNKKDIMTDDSFMIQGRSSEDQFNSQSAADLSLVSDIVGATEFMNSTQEGSHNKTETLNFHEPDDLFMVLDRDSAAEQSPAPWSIEMDYENNISSNEANRKLSEVEIDKNHPSNQEDTDTKTPGVQNGKVSSKETKSKALNGSLGKSKSDITSRSKASPGSRTRVIKNKSEKEEENKKRKEDLMIQRQKRIAERSASKKTGTETKTSLTSAKKGNPKIHPSNEETKKLNKPVLRNSTIERLATARISQQKVSPSQAKSGPTKKPSLKANGVPLQKTTGTEKKKQGAKEVKSSSHKEDAKKTNGEVLAATNGQAKNEMEASIALPMNNGAVQSAEPNNSNLGSKDNGGLSKTSSEKCATYLISEREQVHGNVGQLHADSSLPNHDHALGGNQSRGEEVLHKLSSVPADNKTQHITDVITNPTAALPSNPLAVSAMNSKVNQEIYESNAVFPKVTEKQFSTPPPSNQVMPEPVHSRKKWNSDEDSSKPAKGFRKLLFFGRKS 1182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1113 1182 MobiDBLite consensus disorder prediction 847 882 - -
Ssu8g1113 1182 PANTHER COP1-INTERACTING PROTEIN-RELATED 1 1182 - -
Ssu8g1113 1182 MobiDBLite consensus disorder prediction 1008 1033 - -
Ssu8g1113 1182 MobiDBLite consensus disorder prediction 269 297 - -
Ssu8g1113 1182 MobiDBLite consensus disorder prediction 792 995 - -
Ssu8g1113 1182 PANTHER COP1-INTERACTING PROTEIN 7 1 1182 - -
Ssu8g1113 1182 MobiDBLite consensus disorder prediction 347 426 - -
Ssu8g1113 1182 MobiDBLite consensus disorder prediction 1155 1170 - -
Ssu8g1113 1182 MobiDBLite consensus disorder prediction 409 425 - -
Ssu8g1113 1182 MobiDBLite consensus disorder prediction 467 509 - -
Ssu8g1113 1182 MobiDBLite consensus disorder prediction 269 299 - -
Ssu8g1113 1182 MobiDBLite consensus disorder prediction 119 133 - -
Ssu8g1113 1182 MobiDBLite consensus disorder prediction 477 491 - -
Ssu8g1113 1182 MobiDBLite consensus disorder prediction 119 148 - -
Ssu8g1113 1182 MobiDBLite consensus disorder prediction 134 148 - -
Ssu8g1113 1182 MobiDBLite consensus disorder prediction 1136 1170 - -
Ssu8g1113 1182 MobiDBLite consensus disorder prediction 393 408 - -
Ssu8g1113 1182 MobiDBLite consensus disorder prediction 799 846 - -
Ssu8g1113 1182 MobiDBLite consensus disorder prediction 922 944 - -
Ssu8g1113 1182 MobiDBLite consensus disorder prediction 883 898 - -
Ssu8g1113 1182 MobiDBLite consensus disorder prediction 962 984 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1113 Ssu-Chr8 19744653 19751656 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1113 - - gmx:100815598 1919.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1113 8 19744653 19751656 Ssu8g1113 8 19744653 19751656 ECH