Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1106 ATGGGAAAATCCTTAAGAGGTGAATCCcataattttcattatgtttactTAATGGACTCTAGCGTCAAATATGATACTTTTGCAGTTGTATTAAGTAGTCCAACATCATCCCCTTCTCGCATTCTATCCGAAGCACACCAAACCCCACGCAACCGCGACACACCGGATCACGAAACCACACCCAGCGCGCGCGTTTCGCAGCTCCCGAACTCGGAGAAGCAAACGCAGCGGCGCGACTCGCACCTCGCAACTCGGCCACGCGCGGCGATGGCGTCGTTCCACAGCACCGTCGCTCCCCGCACCTTCCTGCCGTCGATTTCCAAACCCAATCCGAGGGCTCCTCAAGCGAGATCCCTCGCCGGAGCGCAGAACTTTGCGAGATTTTCCCGGAGCCTCATTTTCTCGGGAAAAAAACGCCCGGTGGCGGCGAACTCGGCGGTGGAGGAGTTCGACGTGATATCGGTGCAGAGCGACGACATTACCGACCAGCAAGAGGGCGTGGTGGTGAGCCGCGTCGAGATGGAAGGCGGAGACGGCGAATTGGGGACGCAGGTGAGCGGATTCGGCGCGAACGAGGGTTTGTTGTCGTTGGAAGGGTTTTCTTCTTCGTCTTCGCCGTCTTCTTCGGCGTTGGTTGGGAGTGAGAGCGTGGAGAGCGTGGAGAAGCTGATTGATAGAACTATCAACGCTGCGATTGTGCTCGCCGCTGGTACTGTCGCCATCACCAAACTCGTCACCATTGATAGTGATTACTGGCATGGATGGACGCTATTTGAGATACTAAGATATGCGCCTCAGCACAACTGGTCTGCTTATGAGGAAGCTCTTAAGACAAATCCGGTTCTTGCCAAGATGATGATTAGTGGGATTGTTTACTCTTTAGGGGACTGGATTGCACAGTGCTTTGAAGGTAAACCTCTGTTTGAGTTTGACCGTGCGCGGATGTTCAGATCGGGGCTTGTTGGTTTTACTCTTCATGGTTCTCTTTCTCATTACTATTATCAGTTTTGCGAGGAGCTATTTCCTTACAAAGAATGGTGGGTAGTTCCTGCCAAAGTTGCCTTCGATCAAACTGCATGGTCAGCAATTTGGAACAGCATATATTATACGGTTGTTGCAATCCTGCGTCTTGATCCTCCTATCagtatttttaatgaattgaaGGCAACGTTTTTTCCCATGTTGACGGCAGGTTGGAAGCTATGGCCATTTGCTCATCTCATTACTTATGGTGTGATACCGGTTGAGCAAAGACTTCTTTGGGTGGACACCATAGAGCTTATTTGGGTGACCATACTTTCCACattttcaaatgaaaaatcaGAAGCAAGAAACTCTCACTCTATGGTACCTGCAGAAGTGAAGTCCACCACATCTGTTCATCCTCCTGAGGAGTATAAAGAGTAG 1407 0.4918 MGKSLRGESHNFHYVYLMDSSVKYDTFAVVLSSPTSSPSRILSEAHQTPRNRDTPDHETTPSARVSQLPNSEKQTQRRDSHLATRPRAAMASFHSTVAPRTFLPSISKPNPRAPQARSLAGAQNFARFSRSLIFSGKKRPVAANSAVEEFDVISVQSDDITDQQEGVVVSRVEMEGGDGELGTQVSGFGANEGLLSLEGFSSSSSPSSSALVGSESVESVEKLIDRTINAAIVLAAGTVAITKLVTIDSDYWHGWTLFEILRYAPQHNWSAYEEALKTNPVLAKMMISGIVYSLGDWIAQCFEGKPLFEFDRARMFRSGLVGFTLHGSLSHYYYQFCEELFPYKEWWVVPAKVAFDQTAWSAIWNSIYYTVVAILRLDPPISIFNELKATFFPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDTIELIWVTILSTFSNEKSEARNSHSMVPAEVKSTTSVHPPEEYKE 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1106 468 MobiDBLite consensus disorder prediction 447 468 - -
Ssu8g1106 468 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 190 457 IPR007248 GO:0016021
Ssu8g1106 468 PANTHER PEROXISOMAL MEMBRANE 22 KDA FAMILY PROTEIN 190 457 - -
Ssu8g1106 468 Pfam Mpv17 / PMP22 family 382 434 IPR007248 GO:0016021
Ssu8g1106 468 MobiDBLite consensus disorder prediction 34 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1106 Ssu-Chr8 19590588 19594523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1106 272 440 Miscellaneous Gene Families AT2G14860 26.036 3.43e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1106 K13348 - gmx:100805057 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1106 8 19590588 19594523 Ssu8g1106 8 19590588 19594523 ECH