Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1105 ATGGCCAACTTCCTGGCTCAGTTCCAGGCAATTAAGAACACCTCCGATCGACTCGTCATTTCAGTGGAGGACGTGAGCGACTTGTGGCCAACTGTCAAGCCTGCTTTTGAGGCGCGTTTGCCGTTCAAAAGGGCGACTTTGAATAACAAGACGCGGAACCCTGTCTTTGTTGAGACATTGCCAGCTGAGTTCATATTAACTACAGATTCAAGACTCCGTAGCCGGTTCCCTCAGgagcaatttttattttggttccgaGAGCCATATGCAACTGTTGTACTTGTCACTTGTGAGGATCTGGATGAGTTCAAAACCATCCTTAAACCACGCTTGAAATTAATTGTCCAAAATGACGAAAGGGAGTGGTTTGTTGTATTTGTATCTAAAGCTCATCCAGCTAATGATCAGGCAAACAAAATGGCAAAGAAAGTATATGCTAAACTTGAAGTTGAGTTTAACTCCAAAAAACGAGAAAGATGCTGCAAATATGATATGCATTTCCCTGAAGCAAACTTTTGGGAGGATCTAGAATCAAAGATAATGGAATGCATCAGAAATACCCTGGATAGGCGTGTACAATTTTATGAGGATGAGATACGAAAACTCAGTGAACAGCGCCTCATGCCAATCTGGAACTTCTGCAATTTTTTCATTCTGAAGGAAAGCTTGGCTTTTATGTTTGAAATGGCTCACCTTCACGAAGATGCCTTACGGGAATACGACGAACTAGAACTCTGCTATCTTGAAACAGTTAACATGACTGGAAAGCAGAGAGACTTTGGAGGGGCAGATCATGGTGATGATCAGGCAGCATTGCTTAATCCAGGAAATAAACCATTGACACAGATCGTCCAAGAGGACTCATTTAGGGAGTTTGAATTCAGACAGTATCTATTTGCCTGTCAATCAAAGCTCTTATTCAAGCTAAATCGTCCCATTGAGGCTGCATCACGAGGCTATTCATTCATAATAAGCTTCTCGAAATCCTTGGCATTGCATgagCGTATTCTGCCTTTTTGTATGCGTGAAGTCTGGGTAACAACTGCTTGTTTGGCTTTAATCGAAGCAACCACTTCTAATTATAATGATGGACATGCAGCGCCTGACATAGAGAAAGAGTTCTTTCGTCTTCTGGGTGACCTATACTCTCTAGCTAGAGTTAAGTTCATGAGGCTTGCATATTTAATTGGGTATGGAACTGATATAGAAAAAAGTCCTGTCAACAGTGCTTCCCTCAGCTTGCTACCTTGGCCTAAGCCAGCTGTCTGGCCTTCAGTTCCTGCTGACGCATCAACAGAGGTGCTTGAGAAAGAAAAGCTGATTCTCCAAACACCTTCTAGAACCAAGCATTTTGGTATCCAGAGGAAACCCCTGCCTCTTGAACCTACCGTTCTTCTACGAGAGGCCAACAGGCGGAGGGCTTCACTTTCAGCTGGAAATGTGTCTGAAATGTTTGACAGTCGCCAGGGTCCAATGGAAGGATCAGGTTTTGATGCATCCACAAGAATGTCACCACACAAAGCACTTGCAAGTTCCATGTCACGTACAAATTCTTCACCAGGAAACTTCGATAGCTCAATTGACCGACCGATGAGGCTTGCTGAGATTTTTATTGCTGCTGAGCATGCTTTGAAGCAAACAATTTATAATCCAGAACTGTGGAAATCGTTATCATCATCTGAGGAGTTTGAGCAAAAATATTTAGAGCTAACTAAAGGTGCTGCTGACAATTACCATCGTTCCTGGTGGAAAAGACATGGTGTTGTCCTTGATGGTGAGATAGCAGCTGTTGCTTTTAAGCATGGACATTTTGATCAAGCTGCAAAGTCATATGAGAAGGTTTGTGCCCTGTATGCTGGAGAAGGATGGCAGGATTTGTTGGCTGAGGTCCTTCCCAATTTAGCCGAGTGTCAAAAGATACTTAATGATCAAGCTGGCTACTTATTATCTTGTGTGAGGTTACTTTCTCTTGATGAAGGATTATTTTTGACCAAGGAGCGTCAAGCCTTTCAGTCAGAAGTTGTTCGTCTTGCTCATAGTGAAATGAAGGACCCTGTACCTCTTGATGTATcatcattaattacattttctgGAAATCCTGGGCCTCCATTGGAGTTATGTGATAGGGATCCTGGTATCCTTTCTGTAACTGTATGGAGTGGTTTTCCAGACGATATAACTCTTGATTCAATCAGTCttacattaaatgcaacatatAATACTGATGAAGGTGTAAAGgcATTGAAGAGTTCTACAGCTATTGTGTTACACCCTGGTCGGAATACTATTACCTTGGATCTACCACCTCAGAAACCAGGATCTTATGTTCTTGGAGTTCTTACTGGGCAGATTGGGCAGTTGAGGTTTAGATCTCATAGTTTTTCAAAAGTTGGTCCTGCAGATAGTGATGATTTTATGAGTTATGAAAAGCCAGCTAAACCCATTCTGAAGGTTTTCAAACCTAGGGCTCTTGTTGATCTTGATGCTGCTGTTTCATCTGCTTTGTTGATAAATGAAAACCAATGGGTTGGCATTTTAGTTCGACCAGTAAATTACTCCCTCAAAGCTGCTGTCTTGCATATTGATACTGGTCCAGGGTTGGAGATTAAAGAGTCACACGTAATTGAGATGGAAAGCTATGCTGGTGTATCACAGAATGATGATGAGCAGGTGCAGAATGATGGTGCTCAAATAAAAACTCTAAATTCTGATAAAAATTTGCACGTTTAA 2730 0.4117 MANFLAQFQAIKNTSDRLVISVEDVSDLWPTVKPAFEARLPFKRATLNNKTRNPVFVETLPAEFILTTDSRLRSRFPQEQFLFWFREPYATVVLVTCEDLDEFKTILKPRLKLIVQNDEREWFVVFVSKAHPANDQANKMAKKVYAKLEVEFNSKKRERCCKYDMHFPEANFWEDLESKIMECIRNTLDRRVQFYEDEIRKLSEQRLMPIWNFCNFFILKESLAFMFEMAHLHEDALREYDELELCYLETVNMTGKQRDFGGADHGDDQAALLNPGNKPLTQIVQEDSFREFEFRQYLFACQSKLLFKLNRPIEAASRGYSFIISFSKSLALHERILPFCMREVWVTTACLALIEATTSNYNDGHAAPDIEKEFFRLLGDLYSLARVKFMRLAYLIGYGTDIEKSPVNSASLSLLPWPKPAVWPSVPADASTEVLEKEKLILQTPSRTKHFGIQRKPLPLEPTVLLREANRRRASLSAGNVSEMFDSRQGPMEGSGFDASTRMSPHKALASSMSRTNSSPGNFDSSIDRPMRLAEIFIAAEHALKQTIYNPELWKSLSSSEEFEQKYLELTKGAADNYHRSWWKRHGVVLDGEIAAVAFKHGHFDQAAKSYEKVCALYAGEGWQDLLAEVLPNLAECQKILNDQAGYLLSCVRLLSLDEGLFLTKERQAFQSEVVRLAHSEMKDPVPLDVSSLITFSGNPGPPLELCDRDPGILSVTVWSGFPDDITLDSISLTLNATYNTDEGVKALKSSTAIVLHPGRNTITLDLPPQKPGSYVLGVLTGQIGQLRFRSHSFSKVGPADSDDFMSYEKPAKPILKVFKPRALVDLDAAVSSALLINENQWVGILVRPVNYSLKAAVLHIDTGPGLEIKESHVIEMESYAGVSQNDDEQVQNDGAQIKTLNSDKNLHV 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1105 909 Coils Coil 185 205 - -
Ssu8g1105 909 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 1 883 IPR045126 GO:0048193|GO:1990071
Ssu8g1105 909 PANTHER BNAC09G30770D PROTEIN 1 883 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1105 K20307 - gmx:100787264 1743.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1105 8 19523457 19533330 Ssu8g1105 8 19523457 19533330 ECH