Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1103 ATGGGAAAATCGACGAGCAGTAACAGAGACTGGACGCAGATGTACGCGATCTACGGAATGGAGCAATGGCAAACCCTAATTTTCCTCTTGTGTCAGGCGATACTCTTCTCTGTGTTGTctgttttgtatcttttttatttcgaTCTCGTATGCAACTTTTTCGAGCGAATCTTTTCCGGCACCGGCGGCACCGCGCGATTCGCCGCCGGAATCACCGGCTCCGTGACGGCGCTCTCGGCGCTGTGCCTCTTCTTCGCGGCGGCGAACTTTTTCTACTCGTCCGTGCCGCTGCACTTCGACATGGCGCAGCGCATCGTATCCGCCGTGCACGACTGGTCCTCGGTGAAGCTGGCGCTGGACCTCGGCTGCTGCGGCCGCGGCATCCTCCTGAATGCGGTGGCGACGCAGCTGAAGAAGGAAGGGAGCTGCGGTCGCGTGGTCGGACTCGACCGGTCGAAGCGGACGACGCTGTCGACGCTGCGCGCGGCGAAGATGGAGGGCGTCGGCGAGTACGTGACGTGCCGCGAGGGCGACGCGCGGCGGCTGCCGTTTCCGGACAACTACTTCGACGTGGTGGTGTCCGGCGTGTTCGTGCACACCGTCGGGAGGGAGTACGGCGCCCGCACTGCGGAGGCGGCGGCGGAGAGGATGCGCGCGGTGGCGGAGCTGGTGAGGGTGATGAAGCCCGGCGGAGTGGGAGTGGTGTGGGACCTGCTGCACGTGCCGGAGTACGTGCTCCGGTTGCAGGAGTTGAAGATGGAGGATGTGAGGGTCTCTGAGTGTGTAACGGCCTTCATGGTAAGCAGCCACATCGTATCATTCAGGAAGCCCAGTCAGCACGTGCATGGCCCCGCCGAGGTTCGCTTGGATTGGAGATTATGCTGA 885 0.6124 MGKSTSSNRDWTQMYAIYGMEQWQTLIFLLCQAILFSVLSVLYLFYFDLVCNFFERIFSGTGGTARFAAGITGSVTALSALCLFFAAANFFYSSVPLHFDMAQRIVSAVHDWSSVKLALDLGCCGRGILLNAVATQLKKEGSCGRVVGLDRSKRTTLSTLRAAKMEGVGEYVTCREGDARRLPFPDNYFDVVVSGVFVHTVGREYGARTAEAAAERMRAVAELVRVMKPGGVGVVWDLLHVPEYVLRLQELKMEDVRVSECVTAFMVSSHIVSFRKPSQHVHGPAEVRLDWRLC 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1103 294 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 99 247 IPR029063 -
Ssu8g1103 294 Gene3D Vaccinia Virus protein VP39 78 276 IPR029063 -
Ssu8g1103 294 CDD AdoMet_MTases 119 239 - -
Ssu8g1103 294 Pfam Methyltransferase domain 119 233 IPR013216 GO:0008168
Ssu8g1103 294 PANTHER EXPRESSED PROTEIN 1 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1103 Ssu-Chr8 19427118 19428002 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1103 - - gmx:100804520 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1103 8 19427118 19428002 Ssu8g1103 8 19427118 19428002 ECH