Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1100 ATGGGTGTCTCAAGCAGCAATGGCTTAATATTTGTCTTTCTATTTGCAATCTTTGCAATGCATACTAATGCAGAAACTCAAACCTGCACCAACCGTAAGAGTCCTTACTTTCTCAAGAAAATACAATGCCCTGTTGGGTGCCCTTCAAAGTCACCAGCTGACCCAAAAGCTAAAGTCTGCTATCTTGACTGCAATTCTCCCATATGCAAAACACGATGcaaaaATCGTAAACCAAACTGCAATGGCCCTGGATCTGCATGTTTGGACCCCCGCTTTGTTGGTGCAGATGGCATTGTTTTCTACTTTCATGGAAGGCGCGACGAGCATTTCAGCTTGGTATCTGATGCCAACCTCCAAATCAATGCCCGTTTTATTGGCCTTAGGCCAGCAGGGAGACCGAGGGACTATACTTGGATTCAGGCACTGGGAATCCTCTTTGACTCCCATAACTTTTCTATTGAGGCCACCCCATCAGCAATTTGGGATGAAGAAGTTGACCATTTGAAGCTCTCTTATGATGGAGAGGAACTAGTCATCCAAGAAGGTCACCTCTCTACATGGCAATGCAACGAAAATCAACTTAGAATAGAGAGAACATCAAGCAAGAACAGCATTATGGTTGCCCTCCCAGAAGTTGTGGAGATATATGTCAATGTTGTGCCTGTGACCAAGGAGGACAGTAGAATACACAACTATCAGATCCCTGATAATGATTGTTTTGCGCACTTGGAGGTGCAGTTCAAATTCTATGGTCTATCCTCAAGAGTTGAAGGAGTTCTTTGCAGGACTTATCAGCCAGATTTTCAGAGTCCAGCAAAGCCAGGTGGGGCAATGCCAGTGGTTGGAGGGGAAGACAAATATAGAACCACATCACTTATTTCTGCAGACTGTGGTGTTTGTATATTCTCTCCTGCTAAAGGTTTGGAGAAGGAAGATTCAATGATGGAATATGGTATGATGGACTGCACTGGTGGTGCCAACAGTGGAAATGGGATAGTTTGCAGAAGATAA 1011 0.4411 MGVSSSNGLIFVFLFAIFAMHTNAETQTCTNRKSPYFLKKIQCPVGCPSKSPADPKAKVCYLDCNSPICKTRCKNRKPNCNGPGSACLDPRFVGADGIVFYFHGRRDEHFSLVSDANLQINARFIGLRPAGRPRDYTWIQALGILFDSHNFSIEATPSAIWDEEVDHLKLSYDGEELVIQEGHLSTWQCNENQLRIERTSSKNSIMVALPEVVEIYVNVVPVTKEDSRIHNYQIPDNDCFAHLEVQFKFYGLSSRVEGVLCRTYQPDFQSPAKPGGAMPVVGGEDKYRTTSLISADCGVCIFSPAKGLEKEDSMMEYGMMDCTGGANSGNGIVCRR 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1100 336 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 6 336 - -
Ssu8g1100 336 Pfam Root cap 246 302 IPR009646 -
Ssu8g1100 336 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) PROTEIN-LIKE PROTEIN 6 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1100 Ssu-Chr8 19349522 19350699 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1100 - - lang:109353708 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1100 8 19349522 19350699 Ssu8g1100 8 19349522 19350699 ECH