Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1095 ATGGCAATGGGTTTGAAACTCACACTCCCTTTGCTCTCGCATTTCCTCCTCACCCAAGCCCCGCACGTGTGGGCCTTCGTCCTCACGTGCTTCACTCCTCCCTACCTCTACATCCTCCTCAATTTCATCATCCTCACCATCGTCGCTTCCTCCAAGctccacaaccaccaccaccaccaccactccCCGCCGGACACCGTCCTCCTCCCCTCCGACCCGGCCATCTACGACGGACCGCCCGCCGCCGTCCAGATCCCCGCTTCCGACACCGTCAACTTCTCCGCCGTCGCCTCTGACGAATACCTTTACGAAACGAAAACGACGCCGAGCCACGACAGTGTCACGGAAGGTAACGGTTCTGTCGGCTACGTCTACGACGAGAACACGCCGGTGAAAGCGACGGTTAACGACGACGACGTTGGCGTTGTCTCTCCAAGCCTGCAGAGGAAAGATTCGTCGGAGTTCGCGTTTGCAAACGAGAACGAGAAACCGCCGGTTTCTGCCAGATTCAGCCACCGGAAAGCAGTTAAAGCCAGTCCCGAAGGGGGGAAGTTGGTGGCGTTGGGAGTGGCGAAGGCGAAGAAGCAGGAGACACTGGAGAGCACGTGGAGGACGATAACGGAGGGGCGAGCGATGCCGTTAACTCGGCATTTGAAGAAGGCGGAGACGTGGGAGACGCAGGGGACGCCGTTGAGGGATTTGAACGGCGGGGCGGGGATGAAGAAGTCGGAGACGTTTGCCGGGAGGGAGAAGAACGCGGCGGCGAGGCTGCGGAAGGAGCCGTCGCTGAGTCAGGACGAGTTGAACCGCCGAGTGGAAGCGTTCATCAACAAGTTCAACGCGGAGATGAGGTTGCAGAGGCAGGAGTCGCTGAGACAGTACAGGGAGATGGTGAATCCAGGAACTCACTGA 912 0.5735 MAMGLKLTLPLLSHFLLTQAPHVWAFVLTCFTPPYLYILLNFIILTIVASSKLHNHHHHHHSPPDTVLLPSDPAIYDGPPAAVQIPASDTVNFSAVASDEYLYETKTTPSHDSVTEGNGSVGYVYDENTPVKATVNDDDVGVVSPSLQRKDSSEFAFANENEKPPVSARFSHRKAVKASPEGGKLVALGVAKAKKQETLESTWRTITEGRAMPLTRHLKKAETWETQGTPLRDLNGGAGMKKSETFAGREKNAAARLRKEPSLSQDELNRRVEAFINKFNAEMRLQRQESLRQYREMVNPGTH 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1095 303 PANTHER DUF761 DOMAIN PROTEIN 1 301 - -
Ssu8g1095 303 Pfam Cotton fibre expressed protein 265 299 IPR008480 -
Ssu8g1095 303 Pfam Domain of unknown function (DUF4408) 21 53 IPR025520 -
Ssu8g1095 303 PANTHER COTTON FIBER (DUF761) 1 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1095 Ssu-Chr8 19272429 19274073 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1095 - - gmx:100818795 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1095 8 19272429 19274073 Ssu8g1095 8 19272429 19274073 ECH