Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1082 ATGGCTGCCGCCGGGCCCCAGAAGCCGAGCTCCGACGCGCGGCTCTTCGCGCTCTGCCCCTTTTGGAGTTCGAACCACTCGGAAGCGAGCGTTCAAAGGCCCTCCAAAACGGTGTCGTCCGTGGCCAGGTCGCTCCTCCCTCCTCGCCGGAGACTCCGTCTCGATCCTTCCAGTTACCTCTACTTTCCATATGAACCGGGGAAGCAGGCGAGGAGCGCGGTGCGGTTGAAAAACACCAGCAAGTCTCACGTTGCTTTCAAGtttCAAACGACGGCGCCAAAGAGTTGTTACATGCGGCCTCCGGGTGGTATTCTTGCGCCTGGGGAAAGTTTAATTGCAAcggTGTTTAAGTTTGTGGAGCAACCAGAAAACAATGAGAAGTTGTCGGAGCAGAAGAACAAGGTCAAGTTCAAAATCATGAGTCTCAAAGTGAAGGAAGGAGTGGACTATGTACCTGAGCTGTTTGATGAACAAAAGGATTTAGTGACAGTGGAACGAATATTGAAGGTTGTGTTTATAGATTCAGAACGGCAAAGTCCTGCTTTGGAAAAACTGAAAAGACAGTTGGCTGAAGCTGATGCTGCTGTTGAAGCTCGGAAGAAGCCTCCTGCGGAGGCAGGTCCTCGAGTTGTTGCTGAAGGCCTTGTAATTGATGAATGGaaagagagaagggAGAAGTACCTGGCCCGGCAACAAGTTCAAGCAGTAGATTCAGTTTAA 720 0.5 MAAAGPQKPSSDARLFALCPFWSSNHSEASVQRPSKTVSSVARSLLPPRRRLRLDPSSYLYFPYEPGKQARSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGILAPGESLIATVFKFVEQPENNEKLSEQKNKVKFKIMSLKVKEGVDYVPELFDEQKDLVTVERILKVVFIDSERQSPALEKLKRQLAEADAAVEARKKPPAEAGPRVVAEGLVIDEWKERREKYLARQQVQAVDSV 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1082 239 Pfam MSP (Major sperm protein) domain 52 159 IPR000535 -
Ssu8g1082 239 Gene3D Immunoglobulins 48 176 IPR013783 -
Ssu8g1082 239 ProSiteProfiles Major sperm protein (MSP) domain profile. 51 173 IPR000535 -
Ssu8g1082 239 SUPERFAMILY PapD-like 40 183 IPR008962 -
Ssu8g1082 239 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 26 238 IPR016763 GO:0005789
Ssu8g1082 239 PANTHER VESICLE-ASSOCIATED PROTEIN 4-1 26 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1082 Ssu-Chr8 19023704 19026938 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1082 - - gmx:100778320 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1082 8 19023704 19026938 Ssu8g1082 8 19023704 19026938 ECH