Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1050 ATGGCTGTCAAAGTTTACATTGTGTACTACTCCATGTATGGGCATGTTGAGAAACTAGCTGAACAAATAAAGAAAGGGGCTTCTTCTGTGGAAGATGTTGAGGCCAAATTATGGCAGGTACCCGAGACACTGCCCGAAGAGGTGCTTGGTAAGATGAGTGCACCACCCAAGAGTGATGTACCACTCATTACCCCCAATGAGCTCTCTGAGGCTGACGGCTTCATATTCGGCTTCCCAACAAGGTTTGGAATGATGGCTGCTCAGTTTAAAGCCTTTCTAGATGCCACTGGAGGTTTATGGAGAACACAGCAGCTTGCAGGCAAGCCTGCTGGACTCTTCTACAGCACCGGTTCGCAAGGGGGTGGACAAGAGACTACAGCGCTCACTGCTATCACTCAACTGGCTCATCATGGAATGATTTTTGTTCCAATCGGTTATACATTTGGTGCCGGCATGTTTGAGATGGAGAAAGTGAAAGGTGGAAGTCCATATGGTGCCGGAACTTATGCCGGTGACGGCTCAAGACAGCCAAGTGAGCTTGAGTTGGAGCAAGCATTCCACCAAGGGAAGTACATTGCCACCATCACAAAGAAGCTCAAGCAAGCTGCATAA 612 0.4853 MAVKVYIVYYSMYGHVEKLAEQIKKGASSVEDVEAKLWQVPETLPEEVLGKMSAPPKSDVPLITPNELSEADGFIFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGLFYSTGSQGGGQETTALTAITQLAHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTYAGDGSRQPSELELEQAFHQGKYIATITKKLKQAA 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1050 203 Gene3D - 1 201 IPR029039 -
Ssu8g1050 203 Pfam NADPH-dependent FMN reductase 17 145 IPR005025 GO:0016491
Ssu8g1050 203 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 199 IPR010089 GO:0003955|GO:0010181
Ssu8g1050 203 SUPERFAMILY Flavoproteins 4 200 IPR029039 -
Ssu8g1050 203 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 5 203 - -
Ssu8g1050 203 ProSiteProfiles Flavodoxin-like domain profile. 5 192 IPR008254 GO:0010181
Ssu8g1050 203 PANTHER FLAVOPROTEIN WRBA, FLAVOPROTEIN-LIKE DOMAIN PROTEIN-RELATED 5 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1050 Ssu-Chr8 18171983 18175852 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1050 K03809 - gmx:100305601 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1050 8 18171983 18175852 Ssu8g1050 8 18171983 18175852 ECH