Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1033 ATGACTAGTTCTTCTAACAAGAGGCTTGAGGTTCAAACAGAAGATCAAACTCCGCATAAATGGTGTGTTTCCCTTGGGGAAGAGGCTTTCAAAAGATTCTTCAGCCAGATTAATCCAACAGTGCATAAGGTTTTTGGTGATGGATCACTTTTCAGTCCACTGTTGTTTGGGAAGTTCTTTGATCCTTCTGATGCCTTCCCTCTGTGGGAGTTTGAGTCAGATGTACTGTTATCTCATTTAAGGAGCTCCAGCCAAAACACTGTGGATTGGTGTCAGACAGATGAAGGCTACATATTAAAAGCAGAAATACCAGGAACTGGGAAAAATAACATTCAAGTCCACGTTGATAAAGGGAAGGTTGTGGAAATTAGTGGACAGTGGAGGCAACAAAGAGACTCAAAGGCACATGACTGGAGGTGTGGCCATTGGTGGGAATATGGATATGTGCGAAGGCTTGAGATGCCAGAGGATGCAGATTGGAAGAATATAGAAGCGTACATACATAATgacatatatttagaaatacGAATACCAAAGGGCCAACAGGGTTGTGATCTTCCTCAGGGAAAGGATGTGGCTTAA 582 0.4175 MTSSSNKRLEVQTEDQTPHKWCVSLGEEAFKRFFSQINPTVHKVFGDGSLFSPLLFGKFFDPSDAFPLWEFESDVLLSHLRSSSQNTVDWCQTDEGYILKAEIPGTGKNNIQVHVDKGKVVEISGQWRQQRDSKAHDWRCGHWWEYGYVRRLEMPEDADWKNIEAYIHNDIYLEIRIPKGQQGCDLPQGKDVA 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1033 193 PANTHER 21.7 KDA CLASS VI HEAT SHOCK PROTEIN 4 184 - -
Ssu8g1033 193 PANTHER 21.7 KDA CLASS VI HEAT SHOCK PROTEIN 4 184 - -
Ssu8g1033 193 SUPERFAMILY HSP20-like chaperones 53 180 IPR008978 -
Ssu8g1033 193 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 79 193 IPR002068 -
Ssu8g1033 193 Gene3D - 27 185 IPR008978 -
Ssu8g1033 193 Pfam Hsp20/alpha crystallin family 89 190 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1033 Ssu-Chr8 17714919 17715963 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1033 - - gmx:100306244 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1033 8 17714919 17715963 Ssu8g1033 8 17714919 17715963 ECH