Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1030 ATGGAGGACAAAAAACAGCTCAAGAAGTCTAAGGTTATCAAAATAGACTCTAAAAAATCATGGGAACACCACATCTCGGATGCTACCATTCAAAAGTACCCTGTTGTGGTTCATTTCTCTGCTTTCTGGTGTGTGCCCTCTATAGTTATGAATCCTTTCTTTCAAGAACTAGCCTCCACTTACCAAGATGTTCTGTTCCTGACATTGGATGTGGATGAGGTTAAGGAAATTGCCTCCAAAATGGAAATCAAAGCCATGCCCACCTTTCTGTTGCTGAGCGGAGGGACTCCGGTAGACAAAATTGTGGGTGCAAATCCTGATGAAATAAGGAAAAGGATTGATCATTTTGTTCACTCAACTCGTTCCTACGAATCTGTGTGA 381 0.4173 MEDKKQLKKSKVIKIDSKKSWEHHISDATIQKYPVVVHFSAFWCVPSIVMNPFFQELASTYQDVLFLTLDVDEVKEIASKMEIKAMPTFLLLSGGTPVDKIVGANPDEIRKRIDHFVHSTRSYESV 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1030 126 Gene3D Glutaredoxin 1 124 - -
Ssu8g1030 126 SUPERFAMILY Thioredoxin-like 6 117 IPR036249 -
Ssu8g1030 126 Pfam Thioredoxin 15 114 IPR013766 -
Ssu8g1030 126 PANTHER THIOREDOXIN 1 121 - -
Ssu8g1030 126 CDD TRX_family 19 114 - -
Ssu8g1030 126 ProSiteProfiles Thioredoxin domain profile. 1 118 IPR013766 -
Ssu8g1030 126 PANTHER THIOREDOXIN 1 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1030 Ssu-Chr8 17688142 17689268 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1030 K03671 - gmx:100813627 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1030 8 17688142 17689268 Ssu8g1030 8 17688142 17689268 ECH
Ssu8g1030 8 17688142 17689268 Ssu3g1982 3 65030743 65032233 PCT