Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1018 ATGGATTATGAACCTCCATTCCTCGAGACCTACGAGACCCTTGTGCAAAAACACGTTGGGGATTCAAAGAATGACTCCTCTTTGGTGGAGAGATATGAGATACCTTTGATCGATCTTGGCTGGTTAAATGGTGAGAGAGATGAATGCAAGAAAGAAATAGCAGAAGCTGCTAGTAAATGGGGTTTCTTTCAAGTTGTTAATCATGGTATTTCACAGGAACTGCTGGAGAGCCTTCAGTTTGAGCAAAAGAAAGTGTTCTATCAACCTTTTGTGAATAAGTCTGCACAGGTTAATTTCTCTAGCTTATCTGCCAAACCTTACAGGTGGGGGAATCCATTTGCTACCAATCTGAGACAACTGTCATGGTCAGAAGCCTTTCATTTTTATCTGACAGACATCTCAAGGATGGACCAACATGAAAGTCTGAGatcAAGCATTGAAGCTTTTGCAACAAGAATGTTCCCACTTGCTGAAAGCTTGGCAGAAATACTGGCCTGCAAATTGAATACGAAATCCAACTATTTCCGGGAGCATTGCTTGCCAAATAGTTCTTTCATTCGTCTGAATAGATATCCTCCATGCCCTATATCATCAAAGGTGCATGGCCTGTTGCCTCACAGTGACACTAGTTTTCTTACCATTGTCCATCAGGACCAGGTTGGGGGATTGCAATTGATGAAAGACGGAAAATGGATAGGTGTCAAGCCTAATCCACAAGCTCTAGTCGTTAATATTGGCGACTTCTTTCAGGCATTGAGCAATGGCGTttataaaagcataaaacacCGAGTGGTTGCTGCTGAGAAGGTAGAGAGGTTTTCTATGGCATTCTTCTATTGCCCCTCCGAGGAAGCAGTTATTGAAAGCCACATCAAGCCAGCTATGTACAGGAAATTCACTTTGAGGGAGTATAGACAACAGACTGAGAAAGATGTCAAGCAAACAGGGGATAAATTGGGGCTCTCTAGGTTTCTTCTGTAg 981 0.419 MDYEPPFLETYETLVQKHVGDSKNDSSLVERYEIPLIDLGWLNGERDECKKEIAEAASKWGFFQVVNHGISQELLESLQFEQKKVFYQPFVNKSAQVNFSSLSAKPYRWGNPFATNLRQLSWSEAFHFYLTDISRMDQHESLRSSIEAFATRMFPLAESLAEILACKLNTKSNYFREHCLPNSSFIRLNRYPPCPISSKVHGLLPHSDTSFLTIVHQDQVGGLQLMKDGKWIGVKPNPQALVVNIGDFFQALSNGVYKSIKHRVVAAEKVERFSMAFFYCPSEEAVIESHIKPAMYRKFTLREYRQQTEKDVKQTGDKLGLSRFLL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1018 326 Gene3D - 32 321 IPR027443 -
Ssu8g1018 326 Pfam non-haem dioxygenase in morphine synthesis N-terminal 34 131 IPR026992 -
Ssu8g1018 326 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 180 281 IPR005123 -
Ssu8g1018 326 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 320 - -
Ssu8g1018 326 Pfam 2OG-Fe(II) oxygenase superfamily 186 281 IPR044861 -
Ssu8g1018 326 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 8 320 - -
Ssu8g1018 326 SUPERFAMILY Clavaminate synthase-like 29 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1018 Ssu-Chr8 17434979 17440710 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1018 29 306 Glycosyltransferase AT5G59530 31.494 6.47e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1018 - K04125 gmx:100793950 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1018 8 17434979 17440710 Ssu8g1018 8 17434979 17440710 ECH