Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1016 ATGGAGGAGCTATTCGTAGCGATACTGTCGATGCTTCTAGTGGCAGCGTTGATCCCACTCTACCTATGGAAACGCCGCCAGGATTCTCGATCCCCCCCTCACCGCGACGAACCTCCCCAGGATCCGCGGAGAGAAACCGTGGCGCGCGCAACCGCCACTCGTCGCATGCGTCGCCGACCTGCCGCAGCTGGAGCTAGCACCTCGTCAGATCCACCTGCGACGCTAGAAGAATCTGCTGATGAGAGTGACAATGAAGCTGCTGGCGGAGAGTATTatgaggctaaagcatcaaagaaaaaggaaattaaaaggCAAGAGAGGGAAGCACGGCGTCAGGCTGAGGAAGCTGTACGAGAGTCAAGGCAGGCAAAACAAGATCGTTATTCGGAAATGCGGAGGTTGAAGGATGAGGAGCGTGAGGCACGGGAGTGTATGTTGGAAGAGGAAGCCAGAGCTCAGAAGGCTAAGGAGGAAGAGGCTGCTGCATTAGAGTTTGAGAAGTGGAAAGGTGAATTTTCAATTGATGATGAAGGTACCCTTGAAGAAGTGCAGGATAGTACTGAAGACTTGCTAGCCAATTTTGTTGAATATATAAAGAAACACAAATGTGTTCCCTTAGAAGATCTTGCTGCAGAATTTAAATTGCGTACACAGGAATGTATCAATCGCATCACATCTCTGGAAAGTATGGGTCGGCTTTCGGGTGTTATGGATGACAGAGGGAAATTTATTTACATCTCCCAAGAAGAGATGAAAGCTGTTGCTGATTATATTAAGCGGCAAGGGAGGGTTAGCATTTCCCACTTAGCAAGTAAATCAAACCAGTTCATTGATTTAGAGCCTAAAGCCCAGTACTCTGAGGACATAAATATTGTGGAGGAGATAACTGTCAACTGA 897 0.466 MEELFVAILSMLLVAALIPLYLWKRRQDSRSPPHRDEPPQDPRRETVARATATRRMRRRPAAAGASTSSDPPATLEESADESDNEAAGGEYYEAKASKKKEIKRQEREARRQAEEAVRESRQAKQDRYSEMRRLKDEEREARECMLEEEARAQKAKEEEAAALEFEKWKGEFSIDDEGTLEEVQDSTEDLLANFVEYIKKHKCVPLEDLAAEFKLRTQECINRITSLESMGRLSGVMDDRGKFIYISQEEMKAVADYIKRQGRVSISHLASKSNQFIDLEPKAQYSEDINIVEEITVN 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1016 298 MobiDBLite consensus disorder prediction 92 135 - -
Ssu8g1016 298 SUPERFAMILY "Winged helix" DNA-binding domain 185 254 IPR036390 -
Ssu8g1016 298 PANTHER DDRGK DOMAIN-CONTAINING PROTEIN 1 95 295 - -
Ssu8g1016 298 MobiDBLite consensus disorder prediction 27 52 - -
Ssu8g1016 298 Coils Coil 131 166 - -
Ssu8g1016 298 SMART DDRGK_2 94 278 IPR019153 -
Ssu8g1016 298 MobiDBLite consensus disorder prediction 27 135 - -
Ssu8g1016 298 Coils Coil 92 126 - -
Ssu8g1016 298 Pfam DDRGK domain 95 277 IPR019153 -
Ssu8g1016 298 Gene3D - 189 246 IPR036388 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1016 K23344 - gmx:100810584 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1016 8 17311293 17317334 Ssu8g1016 8 17311293 17317334 ECH