Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0327 ATGATGGAATTCAGATCCAAGTCATGCAGAGGTGAAAGGCTCCAGATTGAAAGCTACTGTGGAGGCAAGGTGGCCCCAACAAGCATGCAAGATCTGAGGTGTTACAGTGCTAATAATGCTTCTTCTGCTTATGCACACCAGACAGATAAGGATGTGAAGGTGAAGAAAGGGAAAAGCACGGCTGCTAAACCATCAAAAAGTTGGAGCTTCAGTGACCCTGAGTTGCAGAGGAAGAAGAGAGTTGCTGGCTATAAAATATATGCTGCAGAGGGCAAAATGAAAGGCTCTCTAAGGAAGAGTTTCAGGTGGATCAAAAATACATACACTCAAGCTGTCTATGGATGGTGGTGA 351 0.4473 MMEFRSKSCRGERLQIESYCGGKVAPTSMQDLRCYSANNASSAYAHQTDKDVKVKKGKSTAAKPSKSWSFSDPELQRKKRVAGYKIYAAEGKMKGSLRKSFRWIKNTYTQAVYGWW 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0327 116 PANTHER OS06G0564000 PROTEIN 2 115 - -
Ssu8g0327 116 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED 2 115 - -
Ssu8g0327 116 MobiDBLite consensus disorder prediction 46 73 - -
Ssu8g0327 116 Pfam Domain of unknown function (DUF3511) 70 114 IPR021899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0327 Ssu-Chr8 5432773 5433123 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0327 - - gmx:100305940 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0327 8 5432773 5433123 Ssu4g3206 4 81150939 81151295 PCT