Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0116 ATGACTCCACCAGCAGGCAGAACCTACCCTCTACATGGATTCCAAGTTGCAATCACTGtggctttctttttttccctcatTGTTCTACTTCCCAAATCAGGTGGATCCGCGTTCTCTGACAGCAGCGAGAGTTTGGAGGAAAGCAAAGTGGTGATAGGGTCAAAGCCTCCTTCTTGTGGAAACAAGTGCATGAACTGTAGGCCTTGCATAGCTACTGTGGTCGTTCCTAATCACAAAAGGAAGGGTTTCAAGGTCTCCTCTCACGGGAAAGATGATAGCTATTACCTCCTTTCATGGAAATGCAAATGTGGGGATAAGTTGTTTCAACCATAA 333 0.4324 MTPPAGRTYPLHGFQVAITVAFFFSLIVLLPKSGGSAFSDSSESLEESKVVIGSKPPSCGNKCMNCRPCIATVVVPNHKRKGFKVSSHGKDDSYYLLSWKCKCGDKLFQP 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0116 110 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4 11 110 IPR039455 GO:0010374
Ssu8g0116 110 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 11 110 - -
Ssu8g0116 110 Pfam Epidermal patterning factor proteins 51 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0116 Ssu-Chr8 1860911 1861485 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0116 - - gmx:102662737 163.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0116 8 1860911 1861485 Ssu4g3433 4 84961439 84962072 PCT