Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2698 ATGGTGAATGACTTGACGACAAGTGTGGATTTTGAGAAATTCACATGGAGAATTGAAGATTTCTCCAAACAAAATCTCATGAAATTGCGCTCCAAGCCTTTCAAAATCCGCGGCTGTACATGGAGGATCCTTGTGTATCCATTGAGGAGGGATGTGAACCATTTTTCCGTGTATTTGATGGTTGCTGATTCTTTACCACCGTATGGATGGAGCAGAAACACGTTTTTCAAGTTAGCTCTAATTAATCAGGTGGATAGGAAGAAGTCAATTGCAAAAGAGACTCAACAAAAGTTCAATGGGGGATATCGTAGCTGGGGTTCATTTTTCTTGAATCTTAGTGATTTCCACGACCATAAACAAGGGTATCTTGTGAGGAACACATGCATCATTGAAGCTCATATTTGTGTCTCCGATTTAGCACCTAAGATTCAAGTCCACCCAAATTGTTCTCCAACCCATGACTCTCAATTAGGTGATCAAGCAACAGAATCATCCTCGGATGATAGGGACACCATTAGTCCCAGAACCTCAGGATCTAGTGCAGCAGAAGGGGAAGCTAGAGGTTCAAATAGTTTGACACTAAGGGAACTCATAGATTTGGAGAGTTTAGGAGCAGAAGAGGAAGCCTTCATTCCACTGTTGGAAGAAGTTTGCATATGGCATCCTAATCTGATACAGTGCCAAAGGGAAAGGACTCCCAGGTTTAGACAATGGGCTTTCACATCTTTGGGCCAAGTTTTGCATTTTCTTAAGACAAAGAAAGCGAAGGACATGAGTGAAGAGGACATAAAGCATCTTCATGGTTTGTGGAAGGAACTTGTCAGGTCCTCAGGATTTGACTTGGCTTGGCTGGAGCCATATGTTCAATCAGCACTGGGTTTGAAAGATTATATGGAAAGAGCAAAGCAGCTGAAGAAACTGAAGGACAATGTTGTTGCTGTGGAGATTAGGATGCAGAGGCTCAGAGGGGAACTGGCTGCTGCTGAAAGGGAGTTTGAGGTCGCAAGGAAAGGCTTGTCAGAAGTAAGAAGAGGTTTCCAAGAGATGGATTTAAATGCTGCAATTGGGTATGCTATGTTTTAG 1083 0.4275 MVNDLTTSVDFEKFTWRIEDFSKQNLMKLRSKPFKIRGCTWRILVYPLRRDVNHFSVYLMVADSLPPYGWSRNTFFKLALINQVDRKKSIAKETQQKFNGGYRSWGSFFLNLSDFHDHKQGYLVRNTCIIEAHICVSDLAPKIQVHPNCSPTHDSQLGDQATESSSDDRDTISPRTSGSSAAEGEARGSNSLTLRELIDLESLGAEEEAFIPLLEEVCIWHPNLIQCQRERTPRFRQWAFTSLGQVLHFLKTKKAKDMSEEDIKHLHGLWKELVRSSGFDLAWLEPYVQSALGLKDYMERAKQLKKLKDNVVAVEIRMQRLRGELAAAEREFEVARKGLSEVRRGFQEMDLNAAIGYAMF 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2698 360 MobiDBLite consensus disorder prediction 150 188 - -
Ssu7g2698 360 SMART math_3 13 115 IPR002083 GO:0005515
Ssu7g2698 360 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 342 - -
Ssu7g2698 360 Coils Coil 304 338 - -
Ssu7g2698 360 ProSiteProfiles MATH/TRAF domain profile. 11 134 IPR002083 GO:0005515
Ssu7g2698 360 Pfam MATH domain 19 134 IPR002083 GO:0005515
Ssu7g2698 360 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 342 - -
Ssu7g2698 360 MobiDBLite consensus disorder prediction 171 187 - -
Ssu7g2698 360 CDD MATH 13 134 IPR002083 GO:0005515
Ssu7g2698 360 SUPERFAMILY TRAF domain-like 13 138 - -
Ssu7g2698 360 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 10 148 IPR008974 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2698 Ssu-Chr7 54365559 54367051 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2698 - - gmx:100797919 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2698 7 54365559 54367051 Ssu4g0742 4 11486219 11487043 PCT