Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2520 ATGCCTTCTAGTCACTTGCTTCTCGAGGAACCCATCAGGATGGTCTCCCTCCTTGAGCCATCCAAGCCTAGTTTTTTCTCTGCAATGACAAAGATTGTTGGTACCCTGGGTCCTAAATCTAGATCTGTTGAAACTATTTCTGGTTGCCTCAAGGCTGGCATGTCTGTGGCTCGTTTTGACTTTTCATGGCATGACCCTGAGTATCACCAGGAGACTTTGGAGAATTTGAAGGTTGCTATCAAGAGCACTAAGAAGCTCTGTGCTGTTATGCTGGACACGGTGGGTGCAGAGATGCAGGTTGTTAACAAAAGTGAGAAAGCAATTTCACTTGAGGCAAATGGTCAGGTTGTTCTAACTCCTGATCAGGGACAAGAAGCCTCTTCAGAGATATTGCCCATCAATTTTGATGGACTGGCTAAGGCGGTGAAGAAGGGAgacactatttttattggtcaaTACTTGTTCACAGGAAGTGAAACTACTTCTGTATGGCTAGAGGTATCTGAAGTCAAAGGGCAAGATGTTGTTTGTATTATAAAGAACACAGCTACATTGGCTGGGTCATTGTTCACTTTGCATGGCTCTCAAATTCATATTGATTTGCCTACCCTCACTGAGAAAGACAAGGAGGTTATAAGCACCTGGggagttaaaaacaaaattgattttctgtCATTGTCATATACCCGGCACGCTGAAGATGTTCGCCAGGCTCGTGAATTGCTTTCAAAATTAGGTGATCTCAGCCAGACTCAAATTTTTGCAAAGATCGAAAATGTTGAGGGATTGACCCATTTTGATGACATTCTACAAGAAGCTGACGGTATTATCCTTTCCCGTGGGAATTTGGGCATTGATCTTCCACCAGAGAAGgtgtttttatttcaaaaatctgCCCTTTACAAGTGTAATATGGCTGGGAAACCTGCTGTGCTTACACGTGTTGTGGATAGCATGACTGACAACTTGAGACCAACTCGTGCTGAAGCCACTGATGTTGCCAATGCTGTTTTAGATGGAAGTGATGCTATACTTCTCGGTGCTGAGACTTTACGTGGGTTGTACCCCGTTGAGACTATTTCTACTGTTGGCAGAATTTGCTCAGAGGCTGAGAAAGTTTTCAATCAAGACCTTTATTTTAAGAAGACAGTCAAGTATGTTGGAGAACCCATGACCCACTTGGAGTCTATTGCATCCTCTGCGGTACGAGCTGCAATTAAGGTGAAGGCatctattataatttgtttcacTTCATCTGGAAGGGCTGCAAGATTGATTGCAAAGTATAGGCCAACAATGCCAGTTCTATCTGTTGTGATCCCCCGACTTAAGACGAATCAGCTAAAGTGGAGCTTTAGTGGAGCTTTTgagGCAAGGCAATCACTTATTGTGAGAGGTCTCTTTCCTATGCTTGCAGATCCTCGACATCCTGCTGAGTCAACAAGTGCAACAAATGAGTCTATTCTTAAGGTTGCCCTTGATCATGGAAAAGCATTGGGAATTATAAAGTCACATGACCGGGTAGTTGTTTGCCAGAAACTTGGTGATGCATCTGTGGTTAAGATTATTGAGCTTGAAGATTAA 1584 0.4141 MPSSHLLLEEPIRMVSLLEPSKPSFFSAMTKIVGTLGPKSRSVETISGCLKAGMSVARFDFSWHDPEYHQETLENLKVAIKSTKKLCAVMLDTVGAEMQVVNKSEKAISLEANGQVVLTPDQGQEASSEILPINFDGLAKAVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGQDVVCIIKNTATLAGSLFTLHGSQIHIDLPTLTEKDKEVISTWGVKNKIDFLSLSYTRHAEDVRQARELLSKLGDLSQTQIFAKIENVEGLTHFDDILQEADGIILSRGNLGIDLPPEKVFLFQKSALYKCNMAGKPAVLTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISTVGRICSEAEKVFNQDLYFKKTVKYVGEPMTHLESIASSAVRAAIKVKASIIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTSATNESILKVALDHGKALGIIKSHDRVVVCQKLGDASVVKIIELED 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2520 527 Gene3D - 371 513 IPR036918 -
Ssu7g2520 527 Gene3D - 96 202 IPR015806 GO:0004743|GO:0006096
Ssu7g2520 527 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 7 375 IPR015813 GO:0003824
Ssu7g2520 527 SUPERFAMILY PK beta-barrel domain-like 103 186 IPR011037 -
Ssu7g2520 527 PANTHER PYRUVATE KINASE 3 527 - -
Ssu7g2520 527 Pfam Pyruvate kinase, alpha/beta domain 395 522 IPR015795 -
Ssu7g2520 527 PANTHER PYRUVATE KINASE 3 527 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu7g2520 527 TIGRFAM pyruv_kin: pyruvate kinase 30 517 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu7g2520 527 PRINTS Pyruvate kinase family signature 85 101 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu7g2520 527 PRINTS Pyruvate kinase family signature 329 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu7g2520 527 PRINTS Pyruvate kinase family signature 253 279 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu7g2520 527 PRINTS Pyruvate kinase family signature 221 235 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu7g2520 527 PRINTS Pyruvate kinase family signature 348 364 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu7g2520 527 PRINTS Pyruvate kinase family signature 280 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu7g2520 527 Pfam Pyruvate kinase, barrel domain 30 375 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu7g2520 527 Gene3D - 30 370 IPR040442 -
Ssu7g2520 527 SUPERFAMILY PK C-terminal domain-like 358 515 IPR036918 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2520 Ssu-Chr7 49364165 49371142 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2520 K00873 - gmx:100802271 1009.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2520 7 49364165 49371142 Ssu7g2520 7 49364165 49371142 ECH
Ssu4g0921 4 14669167 14677251 Ssu7g2520 7 49364165 49371142 PCT