Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1914 ATGGGGCTGTCTTTCACCAAGTTGTTCAGCCGGCTTTTTGCCAAGAAAGAGATGCGTATACTTATGGTAGGTCTCGATGCTGCGGGTAAGACTACCATTCTGTACAAGCTCAAGCTTGGAGAGATTGTCACCACCATTCCCACCATTGGGTTTAATGTGGAAACTGTGGAATATAAGAACATCAGCTTCACTGTCTGGGATGTTGGAGGCCAGGACAAGATCCGTCCTTTGTGGAGACATTACTTCCAAAATACACAAGGACTTATTTTTGTGGTTGATAGCAATGACAGGGACCGAGTTGTTGAAGCTAGAGATGAGCTGCATAGAATGTTGAATGAGGATGAGTTGAGAGATGCCGTGCTTCTGGTTTTTGCCAACAAGCAAGATCTTCCAAATGCTATGAATGCTGCGGAGATAACTGATAAGCTCGGTCTTCATTCCCTTCGTCAGCGTCACTGGTAA 462 0.4524 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1914 153 Pfam ADP-ribosylation factor family 5 153 IPR006689 GO:0003924|GO:0005525
Ssu7g1914 153 Gene3D - 3 153 IPR027417 -
Ssu7g1914 153 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 153 IPR027417 -
Ssu7g1914 153 TIGRFAM small_GTP: small GTP-binding protein domain 16 138 IPR005225 GO:0005525
Ssu7g1914 153 CDD Arf1_5_like 18 153 IPR045872 GO:0003924
Ssu7g1914 153 SMART rab_sub_5 18 151 - -
Ssu7g1914 153 PRINTS GTP-binding SAR1 protein signature 19 42 IPR006689 GO:0003924|GO:0005525
Ssu7g1914 153 PRINTS GTP-binding SAR1 protein signature 47 71 IPR006689 GO:0003924|GO:0005525
Ssu7g1914 153 PRINTS GTP-binding SAR1 protein signature 74 99 IPR006689 GO:0003924|GO:0005525
Ssu7g1914 153 PRINTS GTP-binding SAR1 protein signature 119 140 IPR006689 GO:0003924|GO:0005525
Ssu7g1914 153 PANTHER ADP-RIBOSYLATION FACTOR A1F 1 153 - -
Ssu7g1914 153 SMART arf_sub_2 1 153 - -
Ssu7g1914 153 SMART sar_sub_1 1 153 IPR006689 GO:0003924|GO:0005525
Ssu7g1914 153 PANTHER ADP RIBOSYLATION FACTOR-RELATED 1 153 IPR024156 GO:0005525
Ssu7g1914 153 ProSiteProfiles small GTPase Arf family profile. 11 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1914 Ssu-Chr7 38303387 38305592 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1914 K07937 - ini:109181830 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0551 4 8643550 8645472 Ssu7g1914 7 38303387 38305592 PCT