Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1455 ATGGCATCATCATTTGTGGGTACTTTATTGCCCAACCACTTCACACAAACCACACACTCAGCTGTTCCTGTAAGGAGAGATGTTCCAACAAGGAGGAGACTGCACTTAGCAACAAGAGCAGAGAGCATCACTACTGTCATAGAGAAACTGGGCATCAAGATTGAGAGGAACCCTCCTGAGTCCAAGCTCACTCAACTGGGTGTTAGACAATGGCCCAAATGGGGTTGCCCTCCAAGCAAATTCCCATGGAGATATGAAGCCAAAGAGACTTGCTATCTTCTGGAAGGAAAAGTGAAGGTCTTTCCTAGTGGGTCAAACGAGTCAGTTGAAATTACTGCTGGTGACTTGGTTGTGTTTCCTAAAGGGATGAGTTGCACTTGGGATGTATCTGTTGGTGTGGACAAgcactataaatttgaataa 423 0.4421 MASSFVGTLLPNHFTQTTHSAVPVRRDVPTRRRLHLATRAESITTVIEKLGIKIERNPPESKLTQLGVRQWPKWGCPPSKFPWRYEAKETCYLLEGKVKVFPSGSNESVEITAGDLVVFPKGMSCTWDVSVGVDKHYKFE 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1455 140 Gene3D Jelly Rolls 39 139 IPR014710 -
Ssu7g1455 140 PANTHER OS04G0445200 PROTEIN 32 140 - -
Ssu7g1455 140 SUPERFAMILY RmlC-like cupins 59 137 IPR011051 -
Ssu7g1455 140 CDD cupin_TM1112-like 71 139 - -
Ssu7g1455 140 Pfam EutQ-like cupin domain 64 137 IPR008579 -
Ssu7g1455 140 PANTHER OS04G0445200 PROTEIN 32 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1455 Ssu-Chr7 31038457 31039394 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1455 K06995 - gmx:100499968 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1455 7 31038457 31039394 Ssu7g1455 7 31038457 31039394 ECH
Ssu7g1455 7 31038457 31039394 Ssu7g1455 7 31038457 31039394 PCT