Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1448 ATGGCCTGCTGGTCTGCAGAAAATGCCACAAAGGCCTACCTCAGCACTTTGAAAATGGGTCAAAAATGCAAAGAGCCAGATGTGGCAGAGTTTATATCAGCACTAGCTGCAGGAAACAATGCACAACTGATGGTTGTGGCATGTGCTGGTGCAGCAGACCCCACCACACTAGCATTGGTTGCTGCTGCTCATCAAACTGGTGGCCAAGTCATTTGTATTGTCCCTGGCCATGAAGAGCTAAGTGCCTCCAAAATTGCCTTGGGAATGGCTTCTCATCAAGTTCAATTCATGGTTGGAGAAGCTCAAGAACTGCTGGCAGCAGATTTTGTGCTTATTGACTGCAACCTTGAGAACCATGAAGAGATCCTTAAAGCAGTTCAAGAGGGTAGGAAGCAAAGTGGCACAGTGGTTGTGGGGTACAATGCATTTAGCTGCAGAAAGTCTTGCTTGTCATGTGGATCAAAAACACAGTTGCTGCCTATAGGAGAAGGGTTGCTAGTGACTAGATTCGGAGGGACTGAAACAAGTCCAAAATATGGCAGCAGAATGGGAAAGGTCAAAAGCCGTTGGGTTGTCAAGGTAGACAAATGCACAGGCGAGGAACATGTGTTCAGGGTCAGATTTCCTCACGGGAAAGTGATCCAAGCTTAA 651 0.47 MACWSAENATKAYLSTLKMGQKCKEPDVAEFISALAAGNNAQLMVVACAGAADPTTLALVAAAHQTGGQVICIVPGHEELSASKIALGMASHQVQFMVGEAQELLAADFVLIDCNLENHEEILKAVQEGRKQSGTVVVGYNAFSCRKSCLSCGSKTQLLPIGEGLLVTRFGGTETSPKYGSRMGKVKSRWVVKVDKCTGEEHVFRVRFPHGKVIQA 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1448 216 Pfam Protein of unknown function (DUF1442) 3 205 IPR009902 -
Ssu7g1448 216 Gene3D Vaccinia Virus protein VP39 5 171 IPR029063 -
Ssu7g1448 216 PANTHER BNAA09G06020D PROTEIN 1 216 - -
Ssu7g1448 216 PANTHER DUF1442 FAMILY PROTEIN 1 216 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1448 Ssu-Chr7 30977162 30977964 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1448 - - gmx:100816283 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1448 7 30977162 30977964 Ssu7g1448 7 30977162 30977964 ECH
Ssu7g1448 7 30977162 30977964 Ssu7g1448 7 30977162 30977964 PCT