Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1447 ATGGCTTCCACCATGGCTTCCACCTCCACCACCGAGCCCGACCCCCTGGCCGACGAGGCGGCGGCGAGGGCCGTGAGGAAGCGCTACGAGGGCCTCCTCACGGTGCGCACGCGCGCCATCAAGGGCAAAGGCGCGTGGTACTGGGCCCACCTCGAGCCCATTCTGGTGAGCAACGCGGTGAAGCTCAAATGCTCCCTCTGCGGCTCTCTCTTCTCCGCCTCCAACCCTTCTCGAACCGCTTCCGAGCACCTCAAGCGTGGCACGTGCCCCAATTTCAGCCACTCCTCGTTGCCTTCGCCGTCCCCTATCTCCACCGTGCACTGCCACTCCAACAACGGCAGAAAGAGAACcgcaaccacaaccacaacctcCCCGAGCCAGGACCGGTCCGTTCAGCATTTGGTGTTGTCTGGTGGGAAAGACGATTTGTGTGCTCTCGCTGTTTTTGAGGACAGTGTGAAGAAGCTCAAGAGTCCTAGGAGCTTGTCGCGTGTTGCTCCTCCTGAATTGACCAGGGACCAGGTTAACTCCGCCGTTGAATTGCTAGCAGATTGGTTCTACGAGTCTTGCGGCTCTGTGCCTCTCTCTGCGCTCGAACACCCCAAGTTTCAGTCCTTTCTCGCCCAGCTGGGCTTGCCGGTGACTCTGTTGAGACGCGAGATATACGGGCCTAGACTCGAGGACAGGTTCGGAGTGGCCAAGGCTGAGTCCGAAGCTAGAATGAGGGACGCAATGTTTTTTCAAGTGGGGTGTGACGGGTGGAAGAGCGAGGATGGTGTGGTGAAGTTCATAGTGAATCTTCCCAATGGGAGTGGCGTGTTCCACAAGGTGGTGTTAGCCGGTGAGGGAGTGGTGTCGGAAAAGTACGCTGAGGAGATTTTGTGGGAGGCGGTGATGGGTGTTTGTGGGAGCGGTGTGCAGAGGTGTGTGGGGATTGTAGCAGACAGGTTTAAGGGAAAAGCGTTGAGGAGCTTGGAGGTTCAGAACCACTGGATGGTGAATGTTGCTTGTCAGGTTCAAGGGTTCATGGGTCTGATCAAGGATTTCGGCAACGAGCTCCCACTTTTCAGGGTTGTCGCTGAGAATTCTCTCAAGGTTGCGAATTTCGTCAACACCGAGTCTCGGGTTAGGAGTAGTTTCCTCGGGTACCGGATGCAGGAGATGGACTGTGCAGGGCTGGTTCGGGTTCCTTCCACAAAATGTCATGTGTTGAAGAACTTTGCGTCTGTGTTTCCTATGCTAGAGGACATCCTGAGCTCTGCCGCAGTGATCCAAATGGTGGTGTTGGAGGACACGTTTAAGGTGGCGTGCATGGAGGATCCCCTGGCCAGAGAAGTGGCTGGAATTGTTCAGAGCGAGGTGTTTTGGAATGAACTGGAGGCGGTTTATTCGCTGGTGCAGCTTATCAGAGGAGTGGTTCGGGACATTGAGGCGGAGAGGCCGTTGATTGGCCGGTGTCTGCCGCTTTGGGAGGAGGTTAGAACCAAAGTGAAGGAGTGGTGTGTCAAGTACAGTGTTGTGGAAGAACCTGTGGAGAAAATACTTGAAAAACGATTCAGGAAGAATTATCACCCTGCATGGTCGGCTGCATTTATACTTGATCCACTTTACTTGGTTAAAGATGCAAGTGGAAAGTACCTTCCTCCATTTAAGTGCTTAACTCGTGAGCAAGAGAAAGATGTGGATAAGTTATTGACTAGGCTAGCTTCCAGAGAAGAAGCTCACGTTGTGTTGATGGAGCTCATGAAGTGGAGATCAGAAGGGCTTGACCCTCTTTATGCACAGGCTGTGCAGATGAAACAACTAGACCCGGTTACAGGGAAGATGAAGGTTGCAAATCCACTCAGCAGTAGACTTGTTTGGGAGACTTGCCTCAGCGAGTTTAAATCCCTGGGGAAGCTTGCAGTGAGGCTCATTTTTCTGCATGCAACCTCGTGTGGATTTAAGAGTAATTGTTCTTTCATCAGGAAGATTTCTGCATATAAGCACTCGGGAGTTTCCTTGGAACGAGCTCAGAAAATGGTATATGTTGCAGCTCATGCCAAGCTTGAAAGACGAGACTTTTCCAGTGAGGAAGAGAAGGAAGCAGAACTGCTTGCCATGGCAGGTACAGGGAGTGATGATGGCATGCTGGCTGAGGTCTTTGCTGATGCACCCCTAATAGGTGGAATTGCTTGA 2178 0.523 MASTMASTSTTEPDPLADEAAARAVRKRYEGLLTVRTRAIKGKGAWYWAHLEPILVSNAVKLKCSLCGSLFSASNPSRTASEHLKRGTCPNFSHSSLPSPSPISTVHCHSNNGRKRTATTTTTSPSQDRSVQHLVLSGGKDDLCALAVFEDSVKKLKSPRSLSRVAPPELTRDQVNSAVELLADWFYESCGSVPLSALEHPKFQSFLAQLGLPVTLLRREIYGPRLEDRFGVAKAESEARMRDAMFFQVGCDGWKSEDGVVKFIVNLPNGSGVFHKVVLAGEGVVSEKYAEEILWEAVMGVCGSGVQRCVGIVADRFKGKALRSLEVQNHWMVNVACQVQGFMGLIKDFGNELPLFRVVAENSLKVANFVNTESRVRSSFLGYRMQEMDCAGLVRVPSTKCHVLKNFASVFPMLEDILSSAAVIQMVVLEDTFKVACMEDPLAREVAGIVQSEVFWNELEAVYSLVQLIRGVVRDIEAERPLIGRCLPLWEEVRTKVKEWCVKYSVVEEPVEKILEKRFRKNYHPAWSAAFILDPLYLVKDASGKYLPPFKCLTREQEKDVDKLLTRLASREEAHVVLMELMKWRSEGLDPLYAQAVQMKQLDPVTGKMKVANPLSSRLVWETCLSEFKSLGKLAVRLIFLHATSCGFKSNCSFIRKISAYKHSGVSLERAQKMVYVAAHAKLERRDFSSEEEKEAELLAMAGTGSDDGMLAEVFADAPLIGGIA 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1447 725 PANTHER PUTATIVE ISOFORM 1-RELATED 15 717 - -
Ssu7g1447 725 MobiDBLite consensus disorder prediction 93 129 - -
Ssu7g1447 725 SUPERFAMILY Ribonuclease H-like 251 684 IPR012337 -
Ssu7g1447 725 PANTHER OSJNBA0013A04.12 PROTEIN 15 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1447 Ssu-Chr7 30952000 30956208 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1447 - - gmx:100776665 1215.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1447 7 30952000 30956208 Ssu7g1447 7 30952000 30956208 ECH
Ssu7g1447 7 30952000 30956208 Ssu7g1447 7 30952000 30956208 PCT