Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1442 ATGTCCAAACCTCAAAATGATCCCCTTTTGCAGTCGGAAACAACTTGTGGAACACTTCTCTATGAACTTCAGATAATATGGGACGAAGTTGGGGAGTCTGAGTCTGACAGAGATAGAATGCTGTTTGAGCTTGAACAAGAGTGTCTAGAAGTATACAGAAGGAGGGTAGATCAGGCAAATCGATCTAGAGCTCAATTAAGGCAGGCAATTGCTGATTGTGAGGCAGAACTTGCAGCCATTTGTTCATCAATGGGAGAGCGACCTGTGCATATTAGACAGTCCGATCAAAATGCTGGAAGTCTGAAGGAAGAGCACGCAAGAATTCTTCCTCAGTTGGAGGAGATGCAAAAAAGGAAATCTGAGCGTAGAAATCAATTTATAGAAGTTCAAGAGCAGACTCAAAGCATTTCAATTGAAATTTATGGTCCCAAAGAATGTATTCCTGCCATTGTAGATGAAACTGATTTATCCTTGAGAAAACTTGAAGAATTGCACAGGCAGCTGCATGCACTTCAAATTGAGAAGAGTAGTCGCTTAAAGAAGGTCCAGGAGCACCTGTATACATTAAATTCTCTTTGTTTAGTGCTTGGTTTGGACTTTAAACAGACAATTAATGGAATTCATGCTAGTTTAGTGGACTCAGAAGGATCTAAGAGTGTAAGTAATGACACCATTCAGCAATTAGCTGTTGCTATACAAGAACTGCGGGAAGTTAAATTACAGAGAATGCAGAAGCTCCAAGATCTTGCAACAACAATGTTGGAGCTCTGGAACTTGATGGATACCCCTATTGAAGAGCAACAGATGTTTCAGAATGTTACATGTAATATAGCTGCTGCAGAACATGAAGTAACTGAACCAAACACCTTGTCCGTGGACTTCATCAATTGTGTTGAGGTGGAAGTAGCAAGGTTAGAAGAGTTAAAATCAAGCAAGATGAAAGAGCTCGTATTAAAGAAGAGAACAGAGCTGGAGGAGATTTGTCGAAAGACTCATTTGGTTCCAGAAATAGATATCTACCTCTTCCTTTTTGATGCAGGATCTGTGGACCCTGCTTGTGTGCTTGAACAAATTGAACTTCAGATTGCCCAAGTCAAAGAGGAAGCTTTTAGCAGAAAAGAGATACTTGAAAAGGTTGAGAAATGGTTGGCAGCTTGTGATGAAGAGTCTTGGCTTGAGGAGTACAACAGGGATGATAATCGATACAATGCTGGGAGAGGTGCTCATCTTACTCTCAAGCGAGCTGAGAAAGCTCGGGCCTTGGTTAACAAAATTCCAGCAATGGTGGATGCTTTGACTTCAAAAACTATTGCatgggaaaaggaaaaaggcaTTGAGTTCACATATGATGGTATTCGTCTACTTTCTATGCTTGAAGAATACGCTATATTACGGCAAGAGAAAGAGCAAGAACGTCGTAGGCAGCGGGACCTGAAGAAACTCCAGGGACAAATGATAGCGGAACAGGAGGCACTATATGGGTCAAAACCAAGCCCTTCAAAGCCTCAGAGTGTAAAAAAGGGACCTAGGATGTCAACCGGAGGTGCAGCTAGTAGAAGAGTCTCGCTTGGAGGAGCAATGCTTCAGACTCCAAAACCTGATTCAAAAGCTACTCACTCACGTGCCATGAGAAAGATTGACAAAGCGCACCAAATTGAGCATCTAAATTACTTGGATGATGGCATTTCAGGTTTATCAGCAGCTAGAAGAGGGCTGGACATTGCTGGCGTTCCTGTAAAAAAGCACTCATTTGGTGCTGGGACTCAAGTCATAGAATCTCCTCTGACACGCCAACCTTTTTCTCCCATCTCTTCTAATGTATCTTCAAAAGCTAATACGTTAACTGCTACAGATGAACCGAACAGAGAAGTAAACAGTGGCGCTTAA 1887 0.416 MSKPQNDPLLQSETTCGTLLYELQIIWDEVGESESDRDRMLFELEQECLEVYRRRVDQANRSRAQLRQAIADCEAELAAICSSMGERPVHIRQSDQNAGSLKEEHARILPQLEEMQKRKSERRNQFIEVQEQTQSISIEIYGPKECIPAIVDETDLSLRKLEELHRQLHALQIEKSSRLKKVQEHLYTLNSLCLVLGLDFKQTINGIHASLVDSEGSKSVSNDTIQQLAVAIQELREVKLQRMQKLQDLATTMLELWNLMDTPIEEQQMFQNVTCNIAAAEHEVTEPNTLSVDFINCVEVEVARLEELKSSKMKELVLKKRTELEEICRKTHLVPEIDIYLFLFDAGSVDPACVLEQIELQIAQVKEEAFSRKEILEKVEKWLAACDEESWLEEYNRDDNRYNAGRGAHLTLKRAEKARALVNKIPAMVDALTSKTIAWEKEKGIEFTYDGIRLLSMLEEYAILRQEKEQERRRQRDLKKLQGQMIAEQEALYGSKPSPSKPQSVKKGPRMSTGGAASRRVSLGGAMLQTPKPDSKATHSRAMRKIDKAHQIEHLNYLDDGISGLSAARRGLDIAGVPVKKHSFGAGTQVIESPLTRQPFSPISSNVSSKANTLTATDEPNREVNSGA 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1442 628 MobiDBLite consensus disorder prediction 597 628 - -
Ssu7g1442 628 MobiDBLite consensus disorder prediction 489 539 - -
Ssu7g1442 628 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 503 - -
Ssu7g1442 628 Coils Coil 112 132 - -
Ssu7g1442 628 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 7 622 IPR007145 GO:0000226|GO:0008017
Ssu7g1442 628 Gene3D - 361 495 - -
Ssu7g1442 628 Coils Coil 454 484 - -
Ssu7g1442 628 Coils Coil 49 76 - -
Ssu7g1442 628 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 7 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1442 Ssu-Chr7 30905070 30909104 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1442 11 535 EF-hand Containing Proteins AT5G62250 56.586 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1442 K16732 - gmx:100777734 1100.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1442 7 30905070 30909104 Ssu7g1443 7 30909175 30909369 PCT