Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1441 ATGAACGACATGACTTGGACTACCCTCAAAGGTTCTCCCAGAATGTCTCCCCATCGAAGGCCTCTCTCTTGGATTGTAGTTTTGGTGGGAGCACTGgcagttttcttaatttatgctTCTTCGGTTCTTGTATCATCCCCAATTGGTGCCACGGTTCAGGGATATTTTTATAGTGTAGGTAGTTCAGAGAAGTTAGATTTGCCTGTTTCTTCAGTGAATGAAGCTTCTATTGATGGTCACTTGAATAAGAGTTTAGATCTTGTTGATAATAAATCATCTTCTGATCTGCAATCTTCCACGATTTCCCCTGAGGTGTCTAGTGATAGTAAGATAGAACAAACTGATACTACATCAAACTCACAAGTAGACTTGAGTGAGTCTACTTCAATGAACCTTCCAACGACCAAGGAAGTAGTGAATAGCGATACGGCAGTTTCCAATTCAGGAGAAGCAGTGACTTTGTTCGGCAACAGTTCAGATGTAGCCAATAGTAGTTTGCCTACTCAGGAAAATTCACGACTTGATTTGAATTCCAGTGCAACTATGCCTTTGGCAGGAACCAATTCTTCCAATGAGACAGGTAATATTAGAATGGAGGAACCCTCTTCTGTGGCTTTGATCAATCAGTCGAGTGCTGTAAGTACAGCATCAAATGAGACCTCTATGTCTTTGTATGATTCCACATCAACCGCTGATCCAGCATCAGTAGAGAAGCCAAATAACACATCCTATGCTGGCTGTGATCTGTACCATGGAAATTGGATATACGATCCATTGGGACCACTATACACAAACAATTCATGCCCTGTATTGACACAGATGCAGAATTGCCAGGGTAATGGGAGGCCTGACAAGGATTATGAAAATTGGCGATGGAAGCCCTTTCAATGTGACCTCCCACGATTTGATCCCAAGAAATTTTTGGAGCTGATGAGAGGGAAGACCTTGGCTTTCATTGGAGATTCAGTAGCTCGAAACCAGATGGAATCAATGCTGTGTATTCTGTGGCagGTGGAGGAACCGAAAAATCGGGGAAATCGTAATATGCAACGATATTATTTTAGGTCCACCTCTGTTATGATTGTCAGGATATGGTCCTCGTGGCTTGTCAAACTAACATCCGAACCGTTTGATTATGCTCCAGCCGGTGTGGATAAGCTCCATCTTGATGCCCCTGATGAGAAGTTGATGGATCATATCCAAAACTTTGATGTGGTTGTTCTTTCTTCTGGTCATTGGTTTGCCAAGAAGTCTGTGTATATTTTGAACAATGAGATAGTGGGAGGACAGTTGTGGTGGCCAGACAAGTCTCGGCAGATGAAGATTGACAATGTTAAAGCATATGGCATATCTGTTGAAACAATTCTTACTGCTATTGCCACACTTCCAAATTACACAGGGCTTGCAATTGTGCGTTCCTACTCACCTGACCATTATGAGGGTGGGGCCTGGAACACAGGTGGATCGTGCACTGGTAAGGTTAAGCCTCTTGCACTTGGTCAGCTGGTGGAAAATGGGCACACAAATATAATGCATGAGCAACAGGTGACAGGTTTTAACCGTGCAGTGAAAAGGgcaacaaataaatcaaagttGAGGCTGATGGATATCACTGAAGCCTTTCAATACAGGCATGATGGTCACCCTGGCCCTTACAGGAGTCCTGACCCAAATAAGATTACAAAACGTGGCCCTAATGGAAGGCCACCACCGCAGGATTGCTTGCACTGGTGCATGCCAGGCCCTGTTGATACATGGAATGAACTTGTGGTGGAAATCATTAGGAGAGAATATGAAGGTGGAAGTGCTTCATga 1815 0.4292 MNDMTWTTLKGSPRMSPHRRPLSWIVVLVGALAVFLIYASSVLVSSPIGATVQGYFYSVGSSEKLDLPVSSVNEASIDGHLNKSLDLVDNKSSSDLQSSTISPEVSSDSKIEQTDTTSNSQVDLSESTSMNLPTTKEVVNSDTAVSNSGEAVTLFGNSSDVANSSLPTQENSRLDLNSSATMPLAGTNSSNETGNIRMEEPSSVALINQSSAVSTASNETSMSLYDSTSTADPASVEKPNNTSYAGCDLYHGNWIYDPLGPLYTNNSCPVLTQMQNCQGNGRPDKDYENWRWKPFQCDLPRFDPKKFLELMRGKTLAFIGDSVARNQMESMLCILWQVEEPKNRGNRNMQRYYFRSTSVMIVRIWSSWLVKLTSEPFDYAPAGVDKLHLDAPDEKLMDHIQNFDVVVLSSGHWFAKKSVYILNNEIVGGQLWWPDKSRQMKIDNVKAYGISVETILTAIATLPNYTGLAIVRSYSPDHYEGGAWNTGGSCTGKVKPLALGQLVENGHTNIMHEQQVTGFNRAVKRATNKSKLRLMDITEAFQYRHDGHPGPYRSPDPNKITKRGPNGRPPPQDCLHWCMPGPVDTWNELVVEIIRREYEGGSAS 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1441 604 PANTHER PROTEIN YLS7 10 601 - -
Ssu7g1441 604 MobiDBLite consensus disorder prediction 90 132 - -
Ssu7g1441 604 Pfam PMR5 N terminal Domain 246 298 IPR025846 -
Ssu7g1441 604 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 299 592 IPR026057 GO:0016740
Ssu7g1441 604 MobiDBLite consensus disorder prediction 160 195 - -
Ssu7g1441 604 MobiDBLite consensus disorder prediction 544 573 - -
Ssu7g1441 604 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 10 601 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1441 Ssu-Chr7 30890898 30898068 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1441 - - gmx:100788111 1084.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1441 7 30890898 30898068 Ssu7g1441 7 30890898 30898068 ECH