Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1440 ATGGCCCTCGAAACGCTCCTCGTGAAGGTCAAAACCGCCCTATCGAACAGCTTCGACTCGGTTCCACCGAAGCTTCTGAAGAAGAAACCCTCCTTCAAGTCCAAACCAAACGTCGGCGTTTTGGCGTTCGAGATCGCCGGCGTCATGTCGAAGCTCCTCCACCTCTGGCACTCGCTCTCCGATGCCACCATCGTGCGCATCCGAAACGACGCCGTGAACCTCGAGGGCGTGAGGAAGATCATCTCCAACGACGAGTCGTTCCTCCTCGGACTCGCCTGCGCCGAGTTCGCCGAGTCGCTCCGAGCCGTCGCCAACTCGGTCACCCGACTCAGCGCGCGCTGCGAGGACCCCACCCTGCGCTCCTTCCAGCGGGCCTTCCTCGCGTTCGCGGACTCGGGCAGCGACCCAAACGGGTGGGCCCTCTCGGGCCCAAAAGAAACCGAATCCAAGCTCAAGAAAATGGAGCGTTACGTGACGCTCACGGCAACGCTCTACCGCGAAACGGAGGAGCTCACGGTGTTGGAAACAGCGTTCAGAAAAGCTTTGAATCACGCTGACGGCAACAATAAAGATCAGCAGAAACTCTACGAACTTCAGCAGAAGATTTTTTGGCAGAAGCAAGAGGTGAAGGATCTAAAAGAAAGATCGTTGTGGAGCAGAAGTTTTGACAGCGTTGTTATATTGCTCGTGAGGTTCAGTTTCACCGTTTTAGCGAGGATTAAGGTTGTCTTCGGAATCGGTCATTGCGTGCCTTGTTTGTCTCGTACGTTGTCAGCTTCAGCCACTGTTTATCCATCCGATCAAAACCCTAACGAGTTCGTTTCCGTGTCATTGGAGGAAGGGTCGAAGCTTGATGAAGAGAGTGATGATGATTTGGGGAGCGGGTTTTTTGAGTCAAACTCGAAGCTGTTGAGGCCGCCGGAGAGCACGTTGGGAGCGGCGGGTTTGGCTTTGCACTATGCGAATTTGATCATAGTGATGGAGAAGATGATAAAGTCACCGCACTTGGTTGGGGTGGATGCGAGGGATGATTTGTATGGGATGTTGCCGAGTAGCGTAAGGTGGGGTCTGAGGGGGAGGTTGAGAGGGGTGGGGTTTTGTGCGAGTGATCCTGTGCTGGCTGGGGAGTGGAGGGACGCGCTGGGGAGGATATTGGGGTGGTTGTCGCCTTTGGCGCATAACATGATCAAGTGGCAGAGTGAGAGGAGCTTTGAGCAGCACAACTTGGTGCCCAAGACCAATGTGCTGCTGTTGCAGACTTTGTTCTTTGCCAACAAGGACAAGACGGAGGCTGCCATCACCGAGTTGCTCGTGGGGTTGAACTATATTTGGAGGTTTGAGAGGGAAATGACTGCCAAGGCTTTGTTTGAATGCGCCAATTCTAATGGGTTGTTAAATTTGCACAAACCCAGTTCATGA 1419 0.5384 MALETLLVKVKTALSNSFDSVPPKLLKKKPSFKSKPNVGVLAFEIAGVMSKLLHLWHSLSDATIVRIRNDAVNLEGVRKIISNDESFLLGLACAEFAESLRAVANSVTRLSARCEDPTLRSFQRAFLAFADSGSDPNGWALSGPKETESKLKKMERYVTLTATLYRETEELTVLETAFRKALNHADGNNKDQQKLYELQQKIFWQKQEVKDLKERSLWSRSFDSVVILLVRFSFTVLARIKVVFGIGHCVPCLSRTLSASATVYPSDQNPNEFVSVSLEEGSKLDEESDDDLGSGFFESNSKLLRPPESTLGAAGLALHYANLIIVMEKMIKSPHLVGVDARDDLYGMLPSSVRWGLRGRLRGVGFCASDPVLAGEWRDALGRILGWLSPLAHNMIKWQSERSFEQHNLVPKTNVLLLQTLFFANKDKTEAAITELLVGLNYIWRFEREMTAKALFECANSNGLLNLHKPSS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1440 472 Pfam Protein of unknown function (DUF668) 310 397 IPR007700 GO:0045927
Ssu7g1440 472 PANTHER DUF3475 DOMAIN PROTEIN 1 470 - -
Ssu7g1440 472 Pfam Domain of unknown function (DUF3475) 40 95 IPR021864 GO:0045927
Ssu7g1440 472 PANTHER BNAC09G50660D PROTEIN 1 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1440 Ssu-Chr7 30872715 30874133 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1440 - - gmx:100779328 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1440 7 30872715 30874133 Ssu7g1440 7 30872715 30874133 ECH
Ssu7g1440 7 30872715 30874133 Ssu7g1440 7 30872715 30874133 PCT