Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0855 ATGGACACCGAAGGCTTATCCCTAATCTGCGCTGGCCTCGGAACCGTCGAAGAGGACCTTGAAGGCAACCGAATCGGTTACACCAAAGGCGAATACTGCCTCGATAACCTGAAAGACTTGCTGAGGTTTCTGAGGCGCGACGATCCCCAAACGCGCGACGTGTTCAAGCAAGTTTGCAAGTGGAACATCGTTTCCAAGGACTTGATACCTATCATCGAGTACTATCACGAGGATCGCAACTTGCTTCTGAATGCagtgAAGGTTCTGGTGTTCCTTACGATGCCGATTGAGCCTTCTTCGACGGATATATCTCAGCAGTTGGAGTATCTGTGGGGTTTGAAGTCTGCTGTGACGAACAGTGATGTCGCTGCAGTGATAGTGTCGTTTCTAGAGAGACCGCTTGAGAATTTGGAACGTGATGCTTTCAGTGAGGATGATTGGAAATTGGTACAGCTAGTGCTTACATTATTTAGAAACATCCTAGCTGTACAAGAAATTCCGTCGCAGCAGAAGTCAGGGGGATTTGCTACTCAGTTTTTGTCGCTAAGAGACAGCTTTCTGGAACTTTTGTTCCACGAGAATGTAATGGATATAATCCTGGTTTTATCTCAATATGTTGGTGGTTCTAATGTTTATCTCCGTCAGGATAACTTGCTTCTACTGGAAATTTTCCATTACATTTTTATGGGTCAGGACCCGGAGTTAATTATTAGGGCACACTCGAAGGGATCAAAGGCGGATGAAGACCCCCAAACTTCTCTCAATAGTCTCCAGTCCATTATTGAGGAggaaaagaggagaagaaataTTTGTAGGCTCAGCAATATGAGTCGACATTCACAATTTAGTGGAACATTTGCTCGGCTTACCATGGATGGTTCTAAGGCAGTATTTAAGGGAAATCCTAATTCTTCTCATAATGTGCTGCTTAAAGCACAAAATGTCACTCGGGGTCCTACCAAAAGAATTGCATGGGATCATCCAAGGTTGCCTTCAACAAAGGATAAGCTATTGGAGTTGCTTCATGGATTTGTGAATCAGTTTCTTTCTGGGGGATACAatgCTTTGATGCGATCCATTCGTGAAGATATTGAAAAGGAGCATCCCTCAATTCAAAAAAGCGAtgttgttgttttctttcaagTGGCTGAATTTGTCACTTCATTTCAGTTTTCCAAGTATTCAGCTTCTAAGACCGAGGAGGAAGGAGTCACACTTGAGACTTTTGGTGATAAAGATGCAGATACCTCAGATTTCAGTGGTCAAATATGTGGCCCAATTGCGGCATCCTTGAATGAATCAATGTTTCAATTGGTCATTTCAAAGTGGCGGCATGCCTATGATGGTCTAAAGGAAACAAATGACTTCCAGTTTCTATCTGCAGCTGGTTCTCTTTTGAAAAACATGGAACCACAAACTGCTCGCATCCTTCTGTACAAGTTATTTTATGATCAGACTGAGGAAGGGATGACTCAATTcctattgaatttgatgaaaaCCTTTGACACCCACAAGCAACCCAAAAGTGATCTTGCAGATTTGGTAGAAATCATTCACAAGGTTGTAAAGCTGATGGATAATCTTCAGTCTCGAGGAGCATTGAGGAACAAACGAGGCAAGGTGCTTGTTACCACTTTACCACATAGTTATCAATTCAACTTCATATGCAATACCCTACTTGCTCATAGTGATTTCAATTTcactttaaaagtaataatgtTGCTTCCATTGGCTTTGTTAGAGACAATCAGGGACAAATCAACTGGAGATCATTCTTGCATTCAAAATGAAACTGGCATCTcaactgtcaatcaatcagcaGAAAATCAGCCACAGCAGGGATGCCTACCAAATGCAAATTCCACTGGGGAAGATGTCCCTGGTGATAATGAACATGAAAATCATGTTGAGGAAGATGGGAACTCCCAAGTTGGCTTGGAACCAATGGAAGCCACAAATTCTGATCATGTTAACGAGGATATGTTGGATGGTACTAATGATTTTTCTGAAGATGAGCAATTAAATGCAATTAATGAAGTTGATTTCAAGGTTTCAACGCTAGTCTCTGCCTTTGCAAATCACAATATCATTCAGAAATTATGTTGGTTGCTCAAGTTTTATAAGAGCAATTCCCTTGCTACAAATCATTACATAATAAGCATGCTGCGGAGAATAAGTGATGACCTTGAACTCCATCCTATGCTTTACCAGTTGTCACTGCTCACAACTTTTTATGACATCCTGGTTGAACAAAAGTCATGCCCCTGCAAGGAATATGCGGGTATAGTTGATTTCCTGACTTGTTTGGTCAGAAAAATgctaaagaaaatgaaaaagcaacCTCTCTTGTTTGTGGAAGTCCTTTTCTGGAAGACTCGAAGGGAATGCCATTACATCAATGCTGAATATTTGTTGAGTGAGCTTGGTCATTTGAAGAAAGAAAGTATGAATTGGAATAACACTCAAGGAGAAGGAGAAATTGGTTCATCCCCAGCAAAGATGTGGACTCGTAGAAGCATTGCTGATGCACTTGGTGAGGATGAAGCTGATGTTGTGATTACTCATGACTCAGGATATCAAAAAGACAAGCTTGATGATGTTGTTGAAGGCCTTGCATCTACCTCTGGCAGTAACAGTGGCAAAGATGATCATAATGGGGAGCAATTGATGGAAGATGAATCTCAAATAGCTccaaggagaaagaaaaaacttgTTCTTGATGGTGATTTGGAAAGACAAATTAAGGATCTCTATGAGAAATTCAAAGATGACCAACATTGCAGTCGTTGTATAGCTGAAGTGCTAGATCCAGATGGTAAAATTTCACCAGCTCAAATTTCCAATATGTTAAAAAGATTGGGACTAACAGTTGCACCTAGGAAAAAGATGGGTGATGCCGACAGACCTTTGTCTACTAGCCCTAATCAATTAGATGGTGACGGAATTATAGGagtaaccaataaaaaatcagtGAATTCAGAGGGAAGCCTGTTGGTTCAGCACCTgcaaaaaaggaaaagagtccGAGCTTTCAATGAAGATCAGGAAGCTCTAATCAAAGTTCTATATGAGCAATTCAAGGACCACAGAAGATGTAGTTACATGATAGCCAATGCACTGGATGAGGATGGTAAATTCACTCCTGCCCAAGTCTCTCGAAAACTTAAGCAGCTTGGTTTATCTCTTCCTCAGAAGAAGAGTTCTGGAGGAAAAATGCACCCAAAGGGTGCAGATCTCATGGATTGCTCAAATGATAGAATGAATGAATCTGATGATGAGACATTGATGTCATTGGTAAAAAGgaacaaaatggAGAATGGCAAATTATCAAGGGGACAGTTACATGGACAAACCAGTGAGGATAGATTGTCTACAGATGATTCTGATGATGACATGCTCAGCTCTGTTCTCAAAGAGGATACATTGTCAAGAGATGATTCTGATGATGAAATGCTCAGCTCTGCTTTCAAAACTAGAAGATCCTTCCTTAAATCGAAGCACGATGAGCTTGAAAACATCCAAGTTCAGGAGAGAATAATGggcaatgatttttttaatggagGCATAACAGAAGGTTTCGGAAAGTGGGGTCAAGCAGATTGCGTCGGAATAGAAGATGGCTGA 3624 0.3893 MDTEGLSLICAGLGTVEEDLEGNRIGYTKGEYCLDNLKDLLRFLRRDDPQTRDVFKQVCKWNIVSKDLIPIIEYYHEDRNLLLNAVKVLVFLTMPIEPSSTDISQQLEYLWGLKSAVTNSDVAAVIVSFLERPLENLERDAFSEDDWKLVQLVLTLFRNILAVQEIPSQQKSGGFATQFLSLRDSFLELLFHENVMDIILVLSQYVGGSNVYLRQDNLLLLEIFHYIFMGQDPELIIRAHSKGSKADEDPQTSLNSLQSIIEEEKRRRNICRLSNMSRHSQFSGTFARLTMDGSKAVFKGNPNSSHNVLLKAQNVTRGPTKRIAWDHPRLPSTKDKLLELLHGFVNQFLSGGYNALMRSIREDIEKEHPSIQKSDVVVFFQVAEFVTSFQFSKYSASKTEEEGVTLETFGDKDADTSDFSGQICGPIAASLNESMFQLVISKWRHAYDGLKETNDFQFLSAAGSLLKNMEPQTARILLYKLFYDQTEEGMTQFLLNLMKTFDTHKQPKSDLADLVEIIHKVVKLMDNLQSRGALRNKRGKVLVTTLPHSYQFNFICNTLLAHSDFNFTLKVIMLLPLALLETIRDKSTGDHSCIQNETGISTVNQSAENQPQQGCLPNANSTGEDVPGDNEHENHVEEDGNSQVGLEPMEATNSDHVNEDMLDGTNDFSEDEQLNAINEVDFKVSTLVSAFANHNIIQKLCWLLKFYKSNSLATNHYIISMLRRISDDLELHPMLYQLSLLTTFYDILVEQKSCPCKEYAGIVDFLTCLVRKMLKKMKKQPLLFVEVLFWKTRRECHYINAEYLLSELGHLKKESMNWNNTQGEGEIGSSPAKMWTRRSIADALGEDEADVVITHDSGYQKDKLDDVVEGLASTSGSNSGKDDHNGEQLMEDESQIAPRRKKKLVLDGDLERQIKDLYEKFKDDQHCSRCIAEVLDPDGKISPAQISNMLKRLGLTVAPRKKMGDADRPLSTSPNQLDGDGIIGVTNKKSVNSEGSLLVQHLQKRKRVRAFNEDQEALIKVLYEQFKDHRRCSYMIANALDEDGKFTPAQVSRKLKQLGLSLPQKKSSGGKMHPKGADLMDCSNDRMNESDDETLMSLVKRNKMENGKLSRGQLHGQTSEDRLSTDDSDDDMLSSVLKEDTLSRDDSDDEMLSSAFKTRRSFLKSKHDELENIQVQERIMGNDFFNGGITEGFGKWGQADCVGIEDG 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0855 1207 PANTHER TIMEOUT/TIMELESS-2 1 1169 IPR044998 -
Ssu7g0855 1207 MobiDBLite consensus disorder prediction 606 645 - -
Ssu7g0855 1207 MobiDBLite consensus disorder prediction 606 625 - -
Ssu7g0855 1207 MobiDBLite consensus disorder prediction 962 981 - -
Ssu7g0855 1207 MobiDBLite consensus disorder prediction 626 640 - -
Ssu7g0855 1207 Pfam Timeless protein 27 287 IPR006906 -
Ssu7g0855 1207 MobiDBLite consensus disorder prediction 1104 1132 - -
Ssu7g0855 1207 PANTHER PROTEIN TIMELESS HOMOLOG 1 1169 - -
Ssu7g0855 1207 MobiDBLite consensus disorder prediction 1058 1089 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0855 K03155 - gmx:100796385 1914.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0855 7 17521774 17531716 Ssu7g0855 7 17521774 17531716 ECH