Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0846 ATGGAAAACAACATTAACCGTGAAACAGAAGGGCATGGCTTGCCTAAAGTTCCATCACTAGTTCAACACATACCATCAAATGAAGTAGCTAACTTTGACATTGGTGACTTGAAAAATCTCAGCTCATCTTTCAAAGAAAGTGAAACAATCTTAGCAGGAGATGAACATGCAGCCGTCAATCATCAAAATAAGCATTCAGTATCTATCAACATGCCATTCTCTTGTGAAGAGGTTCAGCCACATAACACCATAAGAGTTCTCTATGGTGGCGAAACTGCTCCTTGTGATGGTGTTCCCATTTTCTCTTCTCAATCAACTACTACAGACTCCAAGCCACCATTGCCATCACATTCAAGGCCAAATGGCAGCGTGCACCTAGAGGCACCAAGCAGGGTCCATTTTACCAATCATGAAAGCATCAAAAGCATGAATGATAAGAGGattgacttttttaaaacattgtccAGCAAACTTGAGGGACAATTATCAATTCTAAGTGGAAGGGTCACTACACAAAGTGTAGAAGACGATAACAGCTTCAGCAACACTAACAAGCCTTTATCTGTTGATTCTTTCTTCAAAGCATCGGAAGGTCCACAGTTACAAACTCCTAAGAAGTCTTCAGAAGAGAAGGTGACTCCTCAAGACAAGCAGTGGCCATTTCTTCTTCGGTTTCCGGTTTCAAGTTTTGGTATTTGTCTTGGAGTTAGCAGTCAAGCAATTCTTTGGAAAGCATTGGCCAAGTCTCCTTCCACTGAATTTCTTCACATAAGCCCGAAAATAAATTTCATCCTATGGTTCATCTCTGTTGCGATTGTTGCTACTGTTTTCACCATCTATCTCTTCAAAATAATTCTCTATTTTGAAGCAGTTCGTCGCGAGTACCATCATCCGGTTCGTGTTAACTTCTTCTTTGCCCCATGGGTAGCTCTCTTGTTCTTAGCTCTTGGAGCTCCCCCATCAGTTGCCAAAGACTTGCATCATGCAGTTTGGTACATTCTAATGATTCCACTGCTCTGCCTTAAGCTCAAGATATATGGACAGTGGATGTTTGGGGGCCAAAGGATGCTCTCAAAGGTGGCCAACCCAACAAATCTCCTTTCAATTGTTGGAAATTTTATGGGGGCCTTATTGGGTGCATCTATGGGCCTAAAAGAAGGGcctcttttcttctttgctATTGGGCTTGCTCACTACATGGTGTTATTTGTAACTCTCTACCAGATGCTTCCAACAAATAAGACCATCCCAAAAGACCTCCATCCAGTGTTCTTTCTTCTTGTCGCACCACCTAGTGTTGCTGCTATGGCATGGGCTGAGATTCAGGGTTCTTTTCATTATGAATCACGGATTGCCTATTTCATTGCCATGTTCCTTTATCTCTCGCTGGCTGCCCGGGTCAATCTTTTCAGAGGATTCAAATTCTCACTTTCATGGTGGGCCTACACTTTTCCAATGACTGCTGCAGCAATTGCAACCGTGAGCTACTCAAATCATGTCACAAATGTTGTAACTCAAGCTTTGAGTGTAATATTGAGTCTCATTGCTACATTCACAGTAACAGCAGTGCTTGTTTCGACTATAGTGCATGCCTTTGTCCTCCAAGACCTCTTTCCCAATGACCTTGCCATGGACACaagtgagagaaagaaaaaaccaCGTAGGAAATGCTTCCAGTTAAGATTTGGAAGCCATGATCATGCCAAAAGAACTGAAAATAACTTGAAGTTTGTGAACTCGGATAAAACGGATGTAGTTTAG 1761 0.4094 MENNINRETEGHGLPKVPSLVQHIPSNEVANFDIGDLKNLSSSFKESETILAGDEHAAVNHQNKHSVSINMPFSCEEVQPHNTIRVLYGGETAPCDGVPIFSSQSTTTDSKPPLPSHSRPNGSVHLEAPSRVHFTNHESIKSMNDKRIDFFKTLSSKLEGQLSILSGRVTTQSVEDDNSFSNTNKPLSVDSFFKASEGPQLQTPKKSSEEKVTPQDKQWPFLLRFPVSSFGICLGVSSQAILWKALAKSPSTEFLHISPKINFILWFISVAIVATVFTIYLFKIILYFEAVRREYHHPVRVNFFFAPWVALLFLALGAPPSVAKDLHHAVWYILMIPLLCLKLKIYGQWMFGGQRMLSKVANPTNLLSIVGNFMGALLGASMGLKEGPLFFFAIGLAHYMVLFVTLYQMLPTNKTIPKDLHPVFFLLVAPPSVAAMAWAEIQGSFHYESRIAYFIAMFLYLSLAARVNLFRGFKFSLSWWAYTFPMTAAAIATVSYSNHVTNVVTQALSVILSLIATFTVTAVLVSTIVHAFVLQDLFPNDLAMDTSERKKKPRRKCFQLRFGSHDHAKRTENNLKFVNSDKTDVV 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0846 586 PANTHER S-TYPE ANION CHANNEL SLAH3 9 582 - -
Ssu7g0846 586 Pfam Voltage-dependent anion channel 225 528 IPR004695 GO:0016021|GO:0055085
Ssu7g0846 586 Gene3D - 221 538 IPR038665 -
Ssu7g0846 586 MobiDBLite consensus disorder prediction 101 125 - -
Ssu7g0846 586 PANTHER - 9 582 IPR030183 GO:0006873|GO:0008308|GO:0016021
Ssu7g0846 586 CDD TDT_SLAC1_like 224 527 - -
Ssu7g0846 586 MobiDBLite consensus disorder prediction 101 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0846 Ssu-Chr7 17073313 17075727 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0846 - - gmx:100789128 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0846 7 17073313 17075727 Ssu7g0846 7 17073313 17075727 ECH
Ssu7g0846 7 17073313 17075727 Ssu7g0846 7 17073313 17075727 PCT