Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0829 AtggcgacagtggtggtggccATAGCAGCAATAGTGATGATGACGGCAGTAACAAcagcggtggtggtggcgatggtggtggcagtgatagGGGCGGCAGCagtggcaacaatggtggtggtagtggtggtgacaacaatgAAAGTTGTGCTAAAGGTGGAACTACAAGatgacaaaattaagaaaaaagccACGAAGGCAGTCTCCAATCTTTCAGGGGTTGAATCAGTCTCCGTGGATATGAAGAACCAGAAATTGACCTTAATTGGAGACATCGACCCGGTCGTTGTAGTAGGCAAGCTGAGGAAGCTGTGTCACACTGACATACTCTCTGTTGGACCAGCCAAGgaggagaagaaggaaaagaataatGACGAGAAAAAGAAGccagaaaacaacaaaaacgaTCAAAATCGGAACTTGGCTGATATTGTGAAGGTCTACAAAGCCTATCATCAGATGAGACCACCACATTATTATTACACAAGTGTGGAAGAAAATCCTAATGCCTGTGTCATTTGCTAA 525 0.3067 MATVVVAIAAIVMMTAVTTAVVVAMVVAVIGAAAVATMVVVVVVTTMKVVLKVELQDDKIKKKATKAVSNLSGVESVSVDMKNQKLTLIGDIDPVVVVGKLRKLCHTDILSVGPAKEEKKEKNNDEKKKPENNKNDQNRNLADIVKVYKAYHQMRPPHYYYTSVEENPNACVIC 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0829 174 Pfam Heavy-metal-associated domain 52 103 IPR006121 GO:0046872
Ssu7g0829 174 SUPERFAMILY HMA, heavy metal-associated domain 46 105 IPR036163 GO:0046872
Ssu7g0829 174 CDD HMA 62 104 IPR006121 GO:0046872
Ssu7g0829 174 MobiDBLite consensus disorder prediction 115 139 - -
Ssu7g0829 174 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 47 174 - -
Ssu7g0829 174 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 47 174 - -
Ssu7g0829 174 Gene3D - 43 118 - -
Ssu7g0829 174 MobiDBLite consensus disorder prediction 115 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0829 Ssu-Chr7 16636705 16640716 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0829 - - gmx:100793345 172.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0829 7 16636705 16640716 Ssu7g0829 7 16636705 16640716 ECH
Ssu7g0829 7 16636705 16640716 Ssu7g0829 7 16636705 16640716 PCT