Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0817 ATGAAAGTTCATCATAGAGAGTTACAACTCAAGTGCATGATGAGGAGCCACACATTCCTTAggatcatttttcttttggtgtttaTTGGATGGCTCACGGCTTGGATCATGTTGCCCACAAAGGTTTTCAAGAACACCTGGACCCCCAAACTGAAAAGCAAGTTAAACTCTACATACTTTAGAGAGCAAGGGACAAATCTCTTGCTTTTCACATTCCCCGTTATGTTCATAGGGGCCCTGAGCTGTATCTATCTCCATCTTCACCAAAAAAGAGCAGAAAAGCTACCTTCCAAAAGCGGAGGAGTAATTAACAGATGGTTATGTTTCTTGAGACGCCCATTTCTTGTGATGTCTCCATTAGAAATTGTCACAGCTATGGAGCTTATTTTTGCACTCATGTTTGCTGCACTCTTGATATGGTCCCTTTCTAATTACTTGCATACCAGCTTTGAGCACCTCCATATGGACAGGGAGGGCGAGAAAGTGTGGCAAGCAAAGTTCAGGAGTGTATCTCTGAGGGTTGGCTACATAGGAAACATATGTTGGGCATTTCTATTCTTTCCAGTCACAAGAGGATCTTCTATTCTGCCCCTTGTTGGACTCACATCTGAGTCAAGCATCAAGTACCACATCTGGCTTGGACATCTATCCATGGTTCTTTTTGCTGCGCATACCATAGGTTTCTTCATCTATTGGGGCATGACACACCAAATGAAAGAGGTGCTAGAGTGGAGCAAGACATATGTATCCAATGTAGCTGGGGTGATTGCAAGTTTAATTGCGTTAGTCATGTGGGTGACCAGCTTTCCTCGCTTCAGGCGTAAAATGTTTGAGGTTTTCTTCTACACTCACCACCTCTACACTCTCTACATCTTATTTTATGCCATCCACGTCGGAGTTGAATACATGTGCATGATTGCTCCGGGGATTTTCCTCTTCTTCGTTGATAGACACCTCAGATTCTTACAATCTCGCCAACATGCTCCGTTGCTATCAGCTCGCTTTTTACCTTGTGGTGCAGTTGAGCTCAACTTCTCCAAGAGTCCAAGTTTATGCTATAACCCCAACAGCATGGTGTTTATAAATGTGCCCAAAATTTCCAAGCTGCAGTGGCACCCTTTTACAGTGATTTCTAGTTGTCATATGGAGACAGATATTCTGAGTGTTGCCATTAAAGCTGAGGGTAACTGGTCAAACAAACTTTATCAGGAACTTTCTTCATCTACTTTGGATCATCTCAACGTTTCTGTTGAAGGACCCTATGGACCAAGTACTTCACATTTTTTAAGGCACGAGCAGCTTGTGTTAGTGAGTGGTGGAAGTGGTATCACTCCCTTCATATCCATAATCCGCGATCTCATAtttcaaaaccaacaagaatCCCATGTTCCAACAGTCTTACTTGTTTGTGCTTTCAAGAATTCTGCTGATCTGACCATGTTAGATCTTATGCTTCCTGTCTTTGGCTCAACAACTCAAATCTCAAAGCTTCAATTGCAAATCGAGGCCTATATTACCAGAGAAAAAGAAGAGCCCCCGAGAGATTCTCAAAAACAGATTCAAACCAAATGGTTTAAGGCTACCCTCTCAGACTCTCCCATCTCAGTTGTATTAGGCCCAAACAACTGGCTTTGGCTTGGTGCTATAATCTCATCGTCTTTTCTCATGTTCCTTCTCCTTTTGGGGATTATCACTCGCTACTATATCTACCCTATTGAAAATAACTCAGAAGAAGTTTATCATTGGACCTTTAAGGTTTTGTGGTTCATGTTTCTACTTTGTGCAGGCATATGCACATGTTGTAGTGCAGTTTTTCTTTGGTGGAAGAGACAAAACACCTTGGAGAGTAAACAAATCACGAATGTAGAAGTTCCAACACCAATAAGATCACCAGGGTCATGGATTTATGGCTCGGAGAGAGAGGTCGAAAGCCTTCCCCATCAGTCTCTAGTGCAAGCAACCAACGTACATTTTGGTGCAAGGCCTGATCTCAAGAAAATTCTGTTTGGGTGCAAAGGCAAAGATATTGGAGTCTTGGTTTGTGGGCCAAGGAGCATGAGACATGAAGTTGCTAGAATCTGTGCTTCTGGTTTAGCTGAAAATCTACACTTTGAATCCATCAGCTTTACTTGGTGA 2136 0.4185 MKVHHRELQLKCMMRSHTFLRIIFLLVFIGWLTAWIMLPTKVFKNTWTPKLKSKLNSTYFREQGTNLLLFTFPVMFIGALSCIYLHLHQKRAEKLPSKSGGVINRWLCFLRRPFLVMSPLEIVTAMELIFALMFAALLIWSLSNYLHTSFEHLHMDREGEKVWQAKFRSVSLRVGYIGNICWAFLFFPVTRGSSILPLVGLTSESSIKYHIWLGHLSMVLFAAHTIGFFIYWGMTHQMKEVLEWSKTYVSNVAGVIASLIALVMWVTSFPRFRRKMFEVFFYTHHLYTLYILFYAIHVGVEYMCMIAPGIFLFFVDRHLRFLQSRQHAPLLSARFLPCGAVELNFSKSPSLCYNPNSMVFINVPKISKLQWHPFTVISSCHMETDILSVAIKAEGNWSNKLYQELSSSTLDHLNVSVEGPYGPSTSHFLRHEQLVLVSGGSGITPFISIIRDLIFQNQQESHVPTVLLVCAFKNSADLTMLDLMLPVFGSTTQISKLQLQIEAYITREKEEPPRDSQKQIQTKWFKATLSDSPISVVLGPNNWLWLGAIISSSFLMFLLLLGIITRYYIYPIENNSEEVYHWTFKVLWFMFLLCAGICTCCSAVFLWWKRQNTLESKQITNVEVPTPIRSPGSWIYGSEREVESLPHQSLVQATNVHFGARPDLKKILFGCKGKDIGVLVCGPRSMRHEVARICASGLAENLHFESISFTW 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0817 711 Pfam Ferric reductase like transmembrane component 175 293 IPR013130 -
Ssu7g0817 711 SFLD Ferric reductase subgroup (FRE) 21 711 - -
Ssu7g0817 711 SFLD Ferric Reductase Domain 39 711 - -
Ssu7g0817 711 PANTHER FERRIC REDUCTION OXIDASE 4-RELATED 19 710 - -
Ssu7g0817 711 Pfam Ferric reductase NAD binding domain 431 695 IPR013121 GO:0016491
Ssu7g0817 711 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 323 427 IPR017927 GO:0016491
Ssu7g0817 711 Gene3D - 609 709 IPR039261 -
Ssu7g0817 711 Gene3D - 415 543 IPR039261 -
Ssu7g0817 711 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 432 706 IPR039261 -
Ssu7g0817 711 PRINTS Cytochrome B-245 heavy chain signature 627 645 IPR000778 GO:0016020|GO:0016491
Ssu7g0817 711 PRINTS Cytochrome B-245 heavy chain signature 252 275 IPR000778 GO:0016020|GO:0016491
Ssu7g0817 711 PRINTS Cytochrome B-245 heavy chain signature 277 297 IPR000778 GO:0016020|GO:0016491
Ssu7g0817 711 PANTHER NADPH OXIDASE 19 710 - -
Ssu7g0817 711 CDD NOX_Duox_like_FAD_NADP 338 507 - -
Ssu7g0817 711 Pfam FAD-binding domain 329 424 IPR013112 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0817 Ssu-Chr7 16424004 16429401 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0817 13 711 Miscellaneous Gene Families AT5G23980 57.725 0.0 831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0817 K00521 - gmx:112998154 1257.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0817 7 16424004 16429401 Ssu7g0817 7 16424004 16429401 ECH