LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu7g0812	ATGGATTCGAGCGACAGTGGTCGCGGTTACTCGAAACGCGAGAGGGACGAGGAGGATTGGGAGTTTGGCGACAAGAGGAAGGAGCGTTCTAGAAAGTTCGGGAACAACGGGGACGAGGGCGAGGGTTCCGACGGAAGCGGAAGGAGGAAGCGTTCTAGCAGAACGGATAGCGAGGATTACGATTTGCGCTCCAAGCAAGGGGCGAAGAAGAGGCAAGAGGAGAGCACGTTGGAGAAGTTGAGCAGTTGGTACGAGGATGGGGAATTGGATGCTTCGGATAAGGCGGCGAGGAAGCGCGGCGACGATGGTGATTTTCATGGCACGAGTGTGGCCGGTAAGGAGGATGGTAAGGGTGAAGGCggcggcggtggtggtggtggccgGGACAAGGGCGGCCACGAGGGCAAGAGTTCCAGGAGGAAATGGGATGAAGTTGATGTTGTTAGTGTGAGGAGAGTGCCGGATGATAAGGGGGAATTCAGGAGTGGGAAGCGCGACGAGTCCAGGGACAGGGAGAGGAGTGGATCTGCTAGGAGTGAGCATGCGGAGGGTAAAGCCTCTGCTGGTGGTGATAGGGTTGTGAAGTCTAATAGTAAGGAGGATAGAAGAGGGGAGTCTGAGAGAGGGAAGAGTAAGGGGAAGTCGGAGTCGGTGGATGTCGGTCGTGAGGACCGGGTTGAGAAGGGCAGGCACCATAGGGCGCCTGCTGGTTATGATGTGGCTGAAACCTGGGATAGGTCGTTGAATGCGGAGGAGGATGGACATGTGCGGATTAGGGATAAGAGTACTAGGGAAAGCGGGAACTCGAATAGGTCGAGGACGCCCGAGAGGAGTGGAAAACGCCATCAAGATTTGGAGAACTCTGAGGTGGATTATGAAAGAAGCAGTAGCTTTAAGAGGAAGGAGGTTGAAAGTGATGGCTATAAGGATGATAGATCCAAAGGAAAAGATGATACTTGGAATGACAGGAGGAAGGATCGGGAAAGTTCTAAAGAAAGTTGGAAAAGGAGGCAGCCGAGTAATGCTGACAAAGATTCAAAAGATGAGGAGAGTGCTTTTGATGACAACCGAGATTGGGAGTTGCCTAGACACGGTTATGATAGGATGGACAACGAAAGGCCCCACGGACGGTTTGGTGGTAGAAAAGATGTGAGCAGGGGGGAAGCTGTTAAAACATCCACAAAGTTTGGGATTTCGAATGACAATTATGATGTGATAGAGATCCAGACCAAGTTTTATGACTATGGGAAATCAGAATCTAACCATGCCAAGAGAAATGAAGCTCATCAACAGTACAATGCTAAATCAGGTGCTAATGATGAAGAAGGGGCATATCATCAGGAAGAAAGAGCAAGGAAGAGTGATTTGTCTGGTTCTGGGACACCAGGTGAAGATCTGAAAGGGGGGAGATATGCTGATGATGACTATGATTTTTATgggggaagaggaagaggacAGAAAGGTGTTGTATCTTCTCGCAGTACTGGTGGCCAAAGTTCTAGTAGTGGTGGCTCACAGCCTCAATATGGAAACCCAGAGTCTGGATCCTTTAACAGAGCTGGTCCACAAGGAATAAAAGGGAACAGGGTTGGTAGAGGAGGAAGGATTAGGCCTACTGGGAGAGACAATCAGCAGGTTGGATTGCCATTGCCAATGATGGGATCACCCTATGGACCTCTTGGGATGCCTCCGCCTGGGCCAATGCAGCCTCTTTCACATGGTATGTCACCTGCTCCCGGTCCACCAATTTCCCCTGGTGTCTTCATTTCACCATTTAGTCCAGCTGTTTGGCCTGGAGCTCAAGGTGTCGATATGAATATAATGGGTGTACCACCTGCAGTGTCTCCTGTACCCCCAGGTCCTTCAGGTCCAAGATTTAATGCTGCTAATATAGGTAACCCACCAAATCCTGCAATGTATTATAACCAATCAGGTCCTGGAAGGGGAATTGCCCCAAGCATTTCTACACCTGGTTTTAATCCTACAGGATCAATGGCTCGAGGAGCCCCACCTGATAAAACTCCAGGGGGATGGGTTCCTCCTAAAAGTAGTGGAACTCTCGGTAAAGCTCCTTCCAGAGGTGAACAGAATGATTATTCTCAAAACTTTGTTGACACTGGTATGCGGCCACAGAATTTCATTAGGGAGCTTGAGCTCACAAATGTTGTAGAGGACTACCCTAAGCTTCGAGAGCTTATACAGAAAAAGGATGAGATTGTGGCAAAATCTGCGTCTGGTCCCATGTATTATAAGTGTGATCTGAAAGAGTTTGAACTGTCTCCAGAGTTCTTTGGAACGAAGTTTGATGTCATTCTTATAGATCCCCCATGGGAGGAGTATGTGCACCGTGCCCCTGGCGTTGCTGACCACATGGAGTACTGGACATTTGAAGAAATAATGAATCTCAAGATTGAGGCTATAGCAGATACGCCTTCTTTCATCTTCCTTTGGGTGGGTGATGGTGTAGGCCTTGAACAAGGTCGTCAGTGTCTAAAGAAGTGGGGATTTCGTAGGTGTGAAGATATATGTTGGGTAAAGACAAACAAAAGTAATGCAACTCCAGGACTGCGGCATGATTCACATACTTTATTTCAACATTCAAAGGAACACTGCTTGATGGGCATAAAAGGAACTGTTCGTCGAAGTACTGATGGCCATATAATTCATGCCAATATTGACACTGACGTCATTATTGCTGAAGAACCTCCTTATGGTTCAACACAAAAGCCTGAAGATATGTATAGGATTATTGAGCACTTTGCCCTTGGAAGGAGGAGACTAGAACTATTTGGTGAAGACCACAATATCCGAGCTGGTTGGCTTACTGTTGGTAAAGAATTGTcatcttcaaattttaataaagagGCATATGTGAAAAGTTTTGCTGACAAAGATGGGAAAGTTTGGCAGGGAGGTGGGGGAAGAAATCCACCTCCGGAGGCACCTCATCTGGTGGTGACTACTCCTGACATAGAGGCTCTTAGGCCAAAGTCACCAATGAAGAACCAACAACAACTGCAGCAGCAGAATTCTGTATCCATTTCTTTGACGACAGCTAGCGCGTCAAACAGAAGGCCTGCTGGGAATTCGCCGCAGAATCCAACTGCACTCGGCGTCAACCAAGACGCTTCTAGCTCAAACCCTTCTACTCCAGCTCCTTGGGCTTCACCTCTGGAGGGCTTCAAGGGACGTGAAGGCTCTGTATTGCCTTCAGATGATAAAGTAATGGATATGTACGGGTTTCATGGACCAGCATCAGCAAGCTATCTAGATTTTGAATCATACAGACAAATGAATATGTTGTAG	3306	0.4701	MDSSDSGRGYSKRERDEEDWEFGDKRKERSRKFGNNGDEGEGSDGSGRRKRSSRTDSEDYDLRSKQGAKKRQEESTLEKLSSWYEDGELDASDKAARKRGDDGDFHGTSVAGKEDGKGEGGGGGGGGRDKGGHEGKSSRRKWDEVDVVSVRRVPDDKGEFRSGKRDESRDRERSGSARSEHAEGKASAGGDRVVKSNSKEDRRGESERGKSKGKSESVDVGREDRVEKGRHHRAPAGYDVAETWDRSLNAEEDGHVRIRDKSTRESGNSNRSRTPERSGKRHQDLENSEVDYERSSSFKRKEVESDGYKDDRSKGKDDTWNDRRKDRESSKESWKRRQPSNADKDSKDEESAFDDNRDWELPRHGYDRMDNERPHGRFGGRKDVSRGEAVKTSTKFGISNDNYDVIEIQTKFYDYGKSESNHAKRNEAHQQYNAKSGANDEEGAYHQEERARKSDLSGSGTPGEDLKGGRYADDDYDFYGGRGRGQKGVVSSRSTGGQSSSSGGSQPQYGNPESGSFNRAGPQGIKGNRVGRGGRIRPTGRDNQQVGLPLPMMGSPYGPLGMPPPGPMQPLSHGMSPAPGPPISPGVFISPFSPAVWPGAQGVDMNIMGVPPAVSPVPPGPSGPRFNAANIGNPPNPAMYYNQSGPGRGIAPSISTPGFNPTGSMARGAPPDKTPGGWVPPKSSGTLGKAPSRGEQNDYSQNFVDTGMRPQNFIRELELTNVVEDYPKLRELIQKKDEIVAKSASGPMYYKCDLKEFELSPEFFGTKFDVILIDPPWEEYVHRAPGVADHMEYWTFEEIMNLKIEAIADTPSFIFLWVGDGVGLEQGRQCLKKWGFRRCEDICWVKTNKSNATPGLRHDSHTLFQHSKEHCLMGIKGTVRRSTDGHIIHANIDTDVIIAEEPPYGSTQKPEDMYRIIEHFALGRRRLELFGEDHNIRAGWLTVGKELSSSNFNKEAYVKSFADKDGKVWQGGGGRNPPPEAPHLVVTTPDIEALRPKSPMKNQQQLQQQNSVSISLTTASASNRRPAGNSPQNPTALGVNQDASSSNPSTPAPWASPLEGFKGREGSVLPSDDKVMDMYGFHGPASASYLDFESYRQMNML	1101

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ssu7g0812	1101	MobiDBLite	consensus disorder prediction	467	481	-	-
	Ssu7g0812	1101	MobiDBLite	consensus disorder prediction	129	389	-	-
	Ssu7g0812	1101	ProSiteProfiles	MT-A70-like family profile.	727	966	IPR007757	-
	Ssu7g0812	1101	PANTHER	N6-ADENOSINE-METHYLTRANSFERASE SUBUNIT METTL14	1	1101	-	-
	Ssu7g0812	1101	MobiDBLite	consensus disorder prediction	488	518	-	-
	Ssu7g0812	1101	MobiDBLite	consensus disorder prediction	1019	1053	-	-
	Ssu7g0812	1101	PANTHER	N6-ADENOSINE-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT	1	1101	IPR045123	-
	Ssu7g0812	1101	MobiDBLite	consensus disorder prediction	421	555	-	-
	Ssu7g0812	1101	Pfam	MT-A70	768	946	IPR007757	-
	Ssu7g0812	1101	ProSitePatterns	N-6 Adenine-specific DNA methylases signature.	771	777	IPR002052	GO:0003676\|GO:0008168\|GO:0032259
	Ssu7g0812	1101	ProSiteProfiles	mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase-like (MT-A70-like) family profile.	541	1089	-	-
	Ssu7g0812	1101	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	763	916	IPR029063	-
	Ssu7g0812	1101	MobiDBLite	consensus disorder prediction	689	705	-	-
	Ssu7g0812	1101	MobiDBLite	consensus disorder prediction	441	455	-	-
	Ssu7g0812	1101	MobiDBLite	consensus disorder prediction	1	113	-	-
	Ssu7g0812	1101	MobiDBLite	consensus disorder prediction	1	401	-	-
	Ssu7g0812	1101	MobiDBLite	consensus disorder prediction	642	705	-	-
	Ssu7g0812	1101	MobiDBLite	consensus disorder prediction	1019	1069	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ssu7g0812	Ssu-Chr7	16258965	16267044	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ssu7g0812	K23960		-	gmx:100798100	1872.44

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ssu7g0812	7	16258965	16267044	Ssu7g0812	7	16258965	16267044	ECH