Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0811 ATGACACGATCCTTGGCAATGGCTTCCTCATCGGTGCTATGTCCGAAACTGGGGAATTGTGCAGTGTCACCATCCTCTTCTATAATTTCACACACAAAATTTCAATCTTTACATCTCACTCCAATGTTCTCTCCACTGGGTCGAGGCCTTTTCTCCCCTTGGAGTGGTTTAAAGCATCTGGGTATCTCAAGTAAACCAAAACCTCTTCTTCACATAGATAGAAAGGGAGGGTGTAAGGGTAAGGTGGTTTATGCTTCTCTCTTTGGGGTTGGAGCCCCTGAAGCTTTGGTCATTGGGGTCGTTGCTTTGTTGGTTTTTGGTCCTAAAGGTCTTGCTGAGGTTGCTCGAAATCTGGGAAAAACATTGCGTGCATTTCAACCCACCATTCGAGAGCTTCAGGATGTTTCAAGGGAATTTAAGAGTACACTTGAACGGGAGATTGGTCTTGATGACAATTTAAGTCCAACCCAAAGTACATTCAATTCCAACCTACGTGATACCACAGCAACTCCATCATCCACTGTTGACCCTAATGGCACGCCAGATCCAAATAGAGCATACAGCTCTGAGGAGTATCTCAAGATTACAGAGGAGCAACTGAAGGCATCTGCTGCACAACAGCAGGGGCAAACACCTCCAAAGGAAGGCGAGAATGAGCCTCAAATCCAGCCTCCTGTCTTGATGTCAGCAGCTAAGGAAACATCTACCACTGTGCCTCCACCTCAGAAGCCAGAAAGTGAGACCTTACCCCTGGATTCATAG 762 0.4646 MTRSLAMASSSVLCPKLGNCAVSPSSSIISHTKFQSLHLTPMFSPLGRGLFSPWSGLKHLGISSKPKPLLHIDRKGGCKGKVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLEREIGLDDNLSPTQSTFNSNLRDTTATPSSTVDPNGTPDPNRAYSSEEYLKITEEQLKASAAQQQGQTPPKEGENEPQIQPPVLMSAAKETSTTVPPPQKPESETLPLDS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0811 253 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATB, CHLOROPLASTIC 9 248 - -
Ssu7g0811 253 PRINTS Bacterial sec-independent translocation TatB protein signature 87 107 - -
Ssu7g0811 253 PRINTS Bacterial sec-independent translocation TatB protein signature 107 126 - -
Ssu7g0811 253 Gene3D - 87 145 - -
Ssu7g0811 253 MobiDBLite consensus disorder prediction 151 185 - -
Ssu7g0811 253 MobiDBLite consensus disorder prediction 228 242 - -
Ssu7g0811 253 MobiDBLite consensus disorder prediction 148 253 - -
Ssu7g0811 253 TIGRFAM tatAE: twin arginine-targeting protein translocase, TatA/E family 89 134 IPR006312 GO:0016021|GO:0043953
Ssu7g0811 253 Pfam mttA/Hcf106 family 90 140 IPR003369 GO:0015031
Ssu7g0811 253 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC 9 248 - -
Ssu7g0811 253 MobiDBLite consensus disorder prediction 200 217 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0811 - - ccaj:109806043 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0811 7 16252934 16257975 Ssu7g0811 7 16252934 16257975 ECH