Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0792 ATGCATAACCAACACAATCTCTTACTCAGACCCCCCACATTGCCCTCTCACTCTCTCACCATCCTTCACCCCACAAAGACAAAGCTCAACAACAAGAAAAAcagcaagaaaagaaaacacactCCTAGTTCCTCCATCAGAAGAAGCAATTGGGTTGTCCCCAAGGCAATGCATTGCACTTCTCTctgcggcggcggcggcgacAACAACAACGATGCCTCTTTCCGCAACTCGAAGCTGAACGAGTCCACGTTCCTCGCTTCTCTCATGCCCAAGACAGAGATTGGTGCAGATCGTTTCCTCCATTCTCATCCACACTACGATGGGCGCGGTGCTCTCATCGCTATCTTCGATTCTGGGGTAGACCCGGCTGCTGCTGGATTACAAGTTACCTCCGATGGGAAACCAAAAATTCTTGATATTCTTGATTGCACTGGTAGTGGAGATATCGATACCTCAAAGGTGGTGAAGGCTGATGCTGATGGTTGTATTTCAGGGCCTTCAGGGGCATCTTTGGTTATCAATACTTCATGGAAAAATCCCTCTGGTGACTGGCATGTGGGTTATAAATTGGTTTATGAGCTCTTTACAGAAAATTTGACTTCTCGTTTGAAGaaagaaagaaagaaaaagcggGATGAGAAAAACCAGGAGGAAATTGCAAAGGCTGTAAAGCAGCTTACTAATTTTGATCAgGAACACATCAAGGTGGAGGGCGCTAAACTTAAAAAGGTTCGTGAAGATCTCCAGAATAGGCTTGATCTTCTGAGGAAGCAATCTGAGagTTATGATGATAAAGGGCCTGCCATAGATGCTGTTGTATGGTTTGATGGAGAGGTTTGGAGGGTTGCTCTTGACACACAGTGTCTTGAGGATGATCCAGATTGTGGGAAGCTTGCTAACTTTGTACCCTTGACTAATTATAGGACTGAGAAGAAGTATGGTATCTTCAGCAAATTAGATGCTTGTACATATGTTGTGAATGTCTATAATGACGGAAATGTCTTAAGTATGGTAACAGATAGCTCCCCTCATGGCACCCATGTTGCTGGTATAGCTACTGCATGCCACCCAGAGGAACCTTTGTTGAATGGAGTTGCACCTGGAGCACAATTAATATCTTGTAAAATTGGGGACTCTCGCTTAGGTTCAATGGAAACTGGAACTGGTTTGACTCGGGCACTGATAGCCGCTGTGGAGCATAAATGTGATCTTATCAACATGAGTTATGGTGAGCCTACATCACTGCCAGACTATGGACGGTTCGTTGACCTTGTGAATGAAGCAGTAAACAAGCATCGTCTGATATTTGTGAGCAGTGCTGGTAATAGTGGGCCAGCATTGAGCACTGTTGGTGCACCTGGTGGTACATCTTCAAATATTATAGGTGTTGGAGCTTATGTTTCTCCTGCTATGGCAGCTGGTGCTCATTGTGTTGTTGAACCTCCTTTTGAGGGGCTTGAATACACTTGGTCTAGCCGCGGACCAACAGCTGATGGAGATCTTGGTGTCTGTGTAAGTGCTCCTGGTTGCGCTGTTGCTCCTGTCCCTACATGGACTCTTCAACGGCGTATGCTTATGAATGGGACATCAATGGCATCTCCATCAGCCTGTGGTGGAATTGCATTGCTCATAAGTGCTATGAAGGCTGAGGGAATTCCTGTGAGTCCATATAGTGTGAGGAAGGCCCTTGAGAATACATCTATTCCCATAGGTGATTCACCTGAGGATAAATTGTCCACTGGGCAAGGGCTTATGCAAGTTGACAAGAGTTATGAATATATACAGCAGTCTCAAAATATTCCAAGTGTTCGGtatcaaataaatatcaaacaatcAGGGAAAACAAATCCTTCATCACGGGGCATCTACTTGAGGGAGGCTAATGCTTGCCGACAACCTACTGAGTGGATGGTGCAAGTTGATCCAAAGTTTCATGAAGATGCCAACAAGCTTGAAGAATTGGCTGTGTTTGAGGAGTGCATTGAGTTACACTCTTCAGATAAGACAATTGTGAAAGCTCCCAAGTATCTACTGCTCACTCATAATGGTCGCACCTTCAACATATTTGTGGATCCTACCGATTTAAATGATGGTCTGCATTATTATGAGGTCTATGGTATTGACTGCAAAGCACCATGGCGTGGTCCTCTTTTCAGAATTCCAATTACTATAACCAAGCCCGTGGCTGTAACTAACAGACCTCCTCAAGTTTCGTTTTCAAAGATGTTATTCCAGCCAGGCCATGTAGAGAGGAAATATATAGAAGTGCCACACGGTGCATCTTGGGTTGAAGCAACCATGAATGCATCAAGTTTTGATACAGCTCGAAGATTTTTTGTGCACACAGTTCAGATATGTCCACTGCAAAGACCTTTTACGCGGAGGAATGTCATAAATTTTTCTTCCCCTGCTGCCGAAAGCTTCACCTTCAGGGTAGTAGGTGGTCAGACATTGGAACTAGTCATAGCTCAGTTTTGGTCAAGTGGCATTGGGAGTCATGAGACCACCAGTGTGGATCTTGAGgTTGTGTTTCATGGTATAAAAGTCAACCAAGAGGAATTTGTACTTGATGGGAGTGAAGCACCAATCAGAATTGATGCTGAAGCGCTACTGGCATCTGAGAAACTTGCACCTGTAGCAATTCTAAATAAGATAAGGGTCCCATATCGACCAATAGATGCTAAGATTAGTGCACTTTCTAGTGATCGTGACAAACTCCCCTCTGGAAAGCAGATACTGGCATTGACATTAACATACAAGATCAAATTGGAAGATGGAGCTGAAATAAAACCTCAAATACCATTTCTAAATGATCGGATATATGATACTAAATTTGAGTctcaattttatatcatttccgATTCTAATAAGCAAGTATATTCAAGTGGAGATGTCTATCCGAACTCTGCAAAACTTCCCAAGGGAGAATACAATTTACAGCTATATTTGAGGCATGACAATGTGCAGATTTTGGAAAAGATGAAGCAGCTGATGTTATTCATTGAGCGAAATTTAGAAGAGAAGGAGATCATTCGGTTATGCTTTTTCTCTCAACCAGATGGTCCACTGATGGGAAATGGTTCCTTTAAGTCCTCAACGTTAGTTCCAGGtataaaagaaGGATTTTATCTTGGTCCTCCACCAAAAGACAAACTTCCTAAGAACTCTCTACAAGGATCTGTATTGGTGGGATCAATATCATATGGGAAACTATCATTTGTTCGTCAAGGGGATCGCAAAAATCCAGAAAAGCATCCTGTGTCATATCGAGTTTCTTATATCGTTCCCCCAAATAAGGTTGATGAGGACATGGGAAAAAATTCTTCTTTATCTTCCAAGAAGACAGTTTCTGAACGCCTAGAACAAGAGGTACGAGATGCAAAAATAAAAGTGCTTGGGGGTCTAAAACAAGAAAACGATGAAGAGTGCTTGGAATGGAAGGAGTTGTCTGCCTCGCTCAAAACTGAATATCCAAAGTATACTCTACTGCTTGCCAAGATTTTGGAAGCTTTAGTTTCTAGGAGTTATATCAAAGACAAATTACATCATGATGAAGAGGTAATTGATGCAGCAAATGAGGTTATTGAAAGTATTGATAGAGAGGagttagtaaaatattttgcaCTAAAAAATGATCCAGAAGATGAGGAAGCAGAGGTGCTTATCCATGTTCCCTATGCTTTTAGTTATCCCTGTCACTGA 3705 0.4124 MHNQHNLLLRPPTLPSHSLTILHPTKTKLNNKKNSKKRKHTPSSSIRRSNWVVPKAMHCTSLCGGGGDNNNDASFRNSKLNESTFLASLMPKTEIGADRFLHSHPHYDGRGALIAIFDSGVDPAAAGLQVTSDGKPKILDILDCTGSGDIDTSKVVKADADGCISGPSGASLVINTSWKNPSGDWHVGYKLVYELFTENLTSRLKKERKKKRDEKNQEEIAKAVKQLTNFDQEHIKVEGAKLKKVREDLQNRLDLLRKQSESYDDKGPAIDAVVWFDGEVWRVALDTQCLEDDPDCGKLANFVPLTNYRTEKKYGIFSKLDACTYVVNVYNDGNVLSMVTDSSPHGTHVAGIATACHPEEPLLNGVAPGAQLISCKIGDSRLGSMETGTGLTRALIAAVEHKCDLINMSYGEPTSLPDYGRFVDLVNEAVNKHRLIFVSSAGNSGPALSTVGAPGGTSSNIIGVGAYVSPAMAAGAHCVVEPPFEGLEYTWSSRGPTADGDLGVCVSAPGCAVAPVPTWTLQRRMLMNGTSMASPSACGGIALLISAMKAEGIPVSPYSVRKALENTSIPIGDSPEDKLSTGQGLMQVDKSYEYIQQSQNIPSVRYQINIKQSGKTNPSSRGIYLREANACRQPTEWMVQVDPKFHEDANKLEELAVFEECIELHSSDKTIVKAPKYLLLTHNGRTFNIFVDPTDLNDGLHYYEVYGIDCKAPWRGPLFRIPITITKPVAVTNRPPQVSFSKMLFQPGHVERKYIEVPHGASWVEATMNASSFDTARRFFVHTVQICPLQRPFTRRNVINFSSPAAESFTFRVVGGQTLELVIAQFWSSGIGSHETTSVDLEVVFHGIKVNQEEFVLDGSEAPIRIDAEALLASEKLAPVAILNKIRVPYRPIDAKISALSSDRDKLPSGKQILALTLTYKIKLEDGAEIKPQIPFLNDRIYDTKFESQFYIISDSNKQVYSSGDVYPNSAKLPKGEYNLQLYLRHDNVQILEKMKQLMLFIERNLEEKEIIRLCFFSQPDGPLMGNGSFKSSTLVPGIKEGFYLGPPPKDKLPKNSLQGSVLVGSISYGKLSFVRQGDRKNPEKHPVSYRVSYIVPPNKVDEDMGKNSSLSSKKTVSERLEQEVRDAKIKVLGGLKQENDEECLEWKELSASLKTEYPKYTLLLAKILEALVSRSYIKDKLHHDEEVIDAANEVIESIDREELVKYFALKNDPEDEEAEVLIHVPYAFSYPCH 1234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0792 1234 Gene3D - 1115 1222 - -
Ssu7g0792 1234 Coils Coil 1111 1131 - -
Ssu7g0792 1234 PANTHER PEPTIDASE S8 68 1205 - -
Ssu7g0792 1234 ProSiteProfiles Serine proteases, subtilase domain profile. 94 592 - -
Ssu7g0792 1234 Pfam Subtilase family 109 568 IPR000209 GO:0006508|GO:0008236
Ssu7g0792 1234 Gene3D Peptidase S8/S53 domain 276 603 IPR036852 GO:0004252|GO:0006508
Ssu7g0792 1234 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 89 571 IPR034051 GO:0006508|GO:0008240
Ssu7g0792 1234 SUPERFAMILY Subtilisin-like 91 606 IPR036852 GO:0004252|GO:0006508
Ssu7g0792 1234 MobiDBLite consensus disorder prediction 30 50 - -
Ssu7g0792 1234 Pfam Tripeptidyl peptidase II 872 1056 IPR022229 -
Ssu7g0792 1234 ProSitePatterns Serine proteases, subtilase family, histidine active site. 345 355 IPR022398 -
Ssu7g0792 1234 Coils Coil 992 1012 - -
Ssu7g0792 1234 Coils Coil 239 266 - -
Ssu7g0792 1234 Gene3D - 604 739 - -
Ssu7g0792 1234 ProSitePatterns Serine proteases, subtilase family, serine active site. 529 539 IPR023828 -
Ssu7g0792 1234 PANTHER TRIPEPTIDYL PEPTIDASE II 68 1205 - -
Ssu7g0792 1234 Gene3D - 153 218 - -
Ssu7g0792 1234 Coils Coil 197 217 - -
Ssu7g0792 1234 MobiDBLite consensus disorder prediction 30 44 - -
Ssu7g0792 1234 PRINTS Subtilisin serine protease family (S8) signature 528 544 IPR015500 -
Ssu7g0792 1234 PRINTS Subtilisin serine protease family (S8) signature 109 128 IPR015500 -
Ssu7g0792 1234 PRINTS Subtilisin serine protease family (S8) signature 341 354 IPR015500 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0792 K01280 - gmx:100787184 2259.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0792 7 15930385 15963004 Ssu7g0792 7 15930385 15963004 ECH
Ssu7g0792 7 15930385 15963004 Ssu7g0792 7 15930385 15963004 PCT