Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0790 ATGGTTACACAGTACGGCATCAAATTCGCCGTCCACCTCATTACCAACCACTTCGGCAATCTCGTCGCtAAAGTATGCGAAAACCTATTTACCCATGGACCCCTCACTTTGGATCAGTTGATTCGCTACACGGAGCTTACTAAGGAGCAAGTCAAAAACTCCCTACTTGTCTTAGTTCAACACAATTGTGCCCAAGCATTTGTTTCTGCTCCTGAAGATGAAGATGATGATGTAGGCAGATTGAGAGTTAGAACTGAGTACCTGGCACTGTTTGATAACATAATCCACCGATTGAGATTTCCCAAATTCTTGGAGATTGTGTCGCGGAAGCTTGATGAAGAATGTGTGGAGCTTCTTGACGGATTGCTTCGCGATGGTAGGCTTACCCTGAAACAAATGGTTGACAGAGCAAGTCAAGGAAAAGAAAATGCTGTGGCTACAAAAGCTGTACGAGACATGCTCTGTAAACTTTTGACAGCTCGATTTGTTGAACGGTGCCCTGCCCCTGAGCCAGTTGTTTCTACCTCATTTAAAGAAGAAACTACTACTAGGAAGCGGGGTGCTAAGTCTGCCAAGATATTTGAAGCACCAGAGACCTTAGAACAACGCGTTCTAGACGCAGCAGTGCCTGGGGATGGAATCAGATTTTCACTCACTGCAGATACTGGATGTAATGTTGATGGAGAAACAAATTCAGATGATGCCCAAATGGTTAATGTTGAAGAAAATGTTGAAAAAGAGGAGCAAATTCTTTGGCGTGCAAATTTTGAGGAGTTTATACGTCATCTTAGGCATAAGGTATTGATTGAGAATGTAAGAACTCAGCATGATGATGGAACTGCTACTGTCTTAAGTGCAGTGTTGGAGGCAACAAGAACTGtagagaaaaaagtgaaaatggaTAATTCAGTTCCCTTGTCACTGGATACAATTATCACAGAGGTGATGAAGACTGATACAGGTCGAACGATGACCATAGATCGTATTAGAGCTTCTCTTGGCCAGTTGGGTTGTTCACAGAGGATGATTGTAGATGATTTATATAGTATTGatttgaagaaaattattGAACGGGCTCGAAATGAAGAGGTTGAGTCAGTTGTGTTGAAAAGGTATGGAAGGGATGCCTACAGAATGTTCAGGCTACTGTCAAAGGATAGTTGTTTTCACGACACAGATCAGATAGCAGCATCTACTCTGGTTGAGAAAAAGGAAGCTCCAAAGTTGCTATTCAAGTTGTGGAAGGATAACTACTTGTATATGGAGAAAGTAGGTTTGACGGGAGCCAAGCTATCAACTATTCTCATGTGGAAAGTTAATAAGCCTCTACTTTGGGAATATGTACTGGACGAGATGCACCATGCTGCCTTAAATTTGAGCCTAAGAATGGCTTTTGAGCAGGAAAAGGATGAAGAGCTTTTAAATGTTCCTAAAGACAAGCTTAAGGAGCCAGGGCCACTCCAGAAGAAATACAAAAGGCTACTAAATGTCTGGTTACTCCTAGGATCATCATTGATGAAACTCGATGATGCTCTAATGCTTTTCCATGACTTCTGA 1557 0.4136 MVTQYGIKFAVHLITNHFGNLVAKVCENLFTHGPLTLDQLIRYTELTKEQVKNSLLVLVQHNCAQAFVSAPEDEDDDVGRLRVRTEYLALFDNIIHRLRFPKFLEIVSRKLDEECVELLDGLLRDGRLTLKQMVDRASQGKENAVATKAVRDMLCKLLTARFVERCPAPEPVVSTSFKEETTTRKRGAKSAKIFEAPETLEQRVLDAAVPGDGIRFSLTADTGCNVDGETNSDDAQMVNVEENVEKEEQILWRANFEEFIRHLRHKVLIENVRTQHDDGTATVLSAVLEATRTVEKKVKMDNSVPLSLDTIITEVMKTDTGRTMTIDRIRASLGQLGCSQRMIVDDLYSIDLKKIIERARNEEVESVVLKRYGRDAYRMFRLLSKDSCFHDTDQIAASTLVEKKEAPKLLFKLWKDNYLYMEKVGLTGAKLSTILMWKVNKPLLWEYVLDEMHHAALNLSLRMAFEQEKDEELLNVPKDKLKEPGPLQKKYKRLLNVWLLLGSSLMKLDDALMLFHDF 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0790 518 Gene3D - 255 346 IPR036388 -
Ssu7g0790 518 Gene3D - 2 74 IPR036388 -
Ssu7g0790 518 PANTHER RNA POLYMERASE III DNA DIRECTED -RELATED 3 518 IPR039748 GO:0003697|GO:0005666
Ssu7g0790 518 Pfam RNA polymerase III subunit RPC82 153 329 IPR008806 GO:0003677|GO:0006351
Ssu7g0790 518 Gene3D - 91 175 IPR036388 -
Ssu7g0790 518 Pfam RNA polymerase III subunit RPC82 helix-turn-helix domain 10 68 IPR013197 -
Ssu7g0790 518 Gene3D - 352 440 IPR036388 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0790 K03023 - gmx:100803947 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0790 7 15816226 15826651 Ssu7g0790 7 15816226 15826651 ECH