Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0786 ATGGTTAGCCAAAGGCAGCGACTCGCTCGGAAGCGATACAAAGCAGAGCACCCTGAACTGTTTCCCAAGCCCGAGCCCACGCCCCCAAAAGACCCtaccaagaagaagaagaagaaaagtagcGCGTTCAAGCGCAAAAGGGCAGAGTCAAAACCCGGCTCCAGAAGACACCCTCTTAGAGTCCCCGGCATGAAGCCCGGCGAGAGCTGTTTCATCTGCAAGGCCAAGGACCACATCGCCAAGCTCTGTCCCCAAAAAGCCGAATGGGAAAAAAACAAGATATGCTTGCGGTGTCGACGACGCGGTCATAGAGCTAAGAACTGCCCTGAGGTGCAAGATGGCACTAAGGATGCCAAGTATTGTTATAACTGTGGGGAAACTGGCCACTCTCTCACACAATGTCCGCATCCTCTTCAAGAGGGAGGGACTAAGTTTGCGGAGTGCTTTGTCTGTAATCAACATGGACACTTGAGTAAAAACTGTCCTCAAAATACTCATGGCATTTATCCAAagGGTGGTTGTTGTAAAATATGTGGTCGTGTGACACATTTAGCGAAAGATTGTCCTGACAAAGGGAAGAAAGGATCTGTTGCTGCTGACAGGCCTGTTGATGGATCAATGAGAATTGAAGAGAGGCCCAGTGGTCAGGTTACCAAATTTGTTAGCGGGGATGATATTGAGGATGACTTCATGACAGATGACATACATAGTGGAGACAAGAGCAAGTCAGTAAAGTCAACAGATGGCCACGTAaaaccaaagaagaagaagggtcCTAAAGTTGTGAACTTTAACTAA 798 0.4536 MVSQRQRLARKRYKAEHPELFPKPEPTPPKDPTKKKKKKSSAFKRKRAESKPGSRRHPLRVPGMKPGESCFICKAKDHIAKLCPQKAEWEKNKICLRCRRRGHRAKNCPEVQDGTKDAKYCYNCGETGHSLTQCPHPLQEGGTKFAECFVCNQHGHLSKNCPQNTHGIYPKGGCCKICGRVTHLAKDCPDKGKKGSVAADRPVDGSMRIEERPSGQVTKFVSGDDIEDDFMTDDIHSGDKSKSVKSTDGHVKPKKKKGPKVVNFN 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0786 265 Pfam Zinc knuckle 148 163 IPR001878 GO:0003676|GO:0008270
Ssu7g0786 265 Pfam Zinc knuckle 120 136 IPR001878 GO:0003676|GO:0008270
Ssu7g0786 265 ProSiteProfiles Zinc finger CCHC-type profile. 95 110 IPR001878 GO:0003676|GO:0008270
Ssu7g0786 265 ProSiteProfiles Zinc finger CCHC-type profile. 121 135 IPR001878 GO:0003676|GO:0008270
Ssu7g0786 265 SUPERFAMILY Retrovirus zinc finger-like domains 63 111 IPR036875 GO:0003676|GO:0008270
Ssu7g0786 265 SMART c2hcfinal6 69 85 IPR001878 GO:0003676|GO:0008270
Ssu7g0786 265 SMART c2hcfinal6 174 190 IPR001878 GO:0003676|GO:0008270
Ssu7g0786 265 SMART c2hcfinal6 120 136 IPR001878 GO:0003676|GO:0008270
Ssu7g0786 265 SMART c2hcfinal6 147 163 IPR001878 GO:0003676|GO:0008270
Ssu7g0786 265 SMART c2hcfinal6 94 110 IPR001878 GO:0003676|GO:0008270
Ssu7g0786 265 PANTHER OS04G0555800 PROTEIN 1 265 - -
Ssu7g0786 265 ProSiteProfiles Zinc finger CCHC-type profile. 148 163 IPR001878 GO:0003676|GO:0008270
Ssu7g0786 265 MobiDBLite consensus disorder prediction 207 265 - -
Ssu7g0786 265 MobiDBLite consensus disorder prediction 233 248 - -
Ssu7g0786 265 MobiDBLite consensus disorder prediction 1 63 - -
Ssu7g0786 265 MobiDBLite consensus disorder prediction 33 53 - -
Ssu7g0786 265 Gene3D - 118 169 - -
Ssu7g0786 265 SUPERFAMILY Retrovirus zinc finger-like domains 114 164 IPR036875 GO:0003676|GO:0008270
Ssu7g0786 265 ProSiteProfiles Zinc finger CCHC-type profile. 175 190 IPR001878 GO:0003676|GO:0008270
Ssu7g0786 265 MobiDBLite consensus disorder prediction 12 32 - -
Ssu7g0786 265 Gene3D - 63 117 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0786 - - gmx:121174300 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0786 7 15733340 15737298 Ssu7g0786 7 15733340 15737298 ECH