Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0776 ATGGATTCGAGAGTAGTTCAAAATCAAGTGAATGAGAACGATGAACATTACCCCCACCTTGATGCCTCGCAACAAGTGACACATGGTGAAGAAGAACTCCACTTTGACCGAGAGAAGAAGTCTGTTCTGAATAAGGCCAAGGCAAAGGCTAAGAAAATCAAGGATACGATTAAGAAGCATGGTCGTCAAGTCCTTGATCGTGGTAGTGAGTGTAACAATGAAGATCAGCACACCCTCGATGACCATGACTTAGATGAGGATGAAGACACGCATGAAGACCCACAAGTTCATGAAACACCAGTTCATGAAAGTGAAGATGTTAAAACTACTACACCTACATCTGAGCAAGTCGAAAATTTAGGGAAGTCAGGAATTGATTTTGGAGGCACAACAGGTACAACAGTTATGGGAGAAGAGCCTCGTCACGATGCACTACTTGGAGACGTTTCTTCAACTACTGAAATTGATCAAAACACAGCCACTGAGCCTGCCAAAACATTTTCTGTGGAAGAGAGGGCAGGGCTACCGAAGGACAATTTGGAGAGGTCAATAGGCTTGGACTTGGAGGAAGAGCCTCACGCTACAGGAAGTAGACCTGAGGCATATACCCCTCCCAATTATCACACCAAAGTCACTGATCCAAGTGGTGTAGGAAAGGATGAAATAGAAATCACACCAGTTGAGGAATCTTTTGCGAGAATGAATGTGCATGATGAGCCCAAACCTACCCCAGAAATTAACGTTCAGCCAACTTTTGTTGATCCTGCTAGAAGCCATGATCAGTTTGTGCCACACCTCTCTGCTGCAGCACAAACTCAGTATCCTTCTGCTGAAAGGCATGATCAGTTCAATCAGGAAACAATATCCACAAATATGAACAGAAACCCCGCAGAAAGTGGACTAAGTTTCAACACCATCACAACCACAGTGGAAGAACAACCTCTCTATGAAGTAAACACTGATAAAGTTGTCTCTCCTAAGGATGTCATAGCTTTTGAGGTAGGTTCAGGAGAGAATGATGACATAAAGGACAAGGTGGTAACAAATGAAGAGCAACAAAAAAGTGGGGATGCTTCTAACATGTCTGGCTCAACTGCACAATATGGCAAGAACATTGCTCACTCTCTAACACAGAAATTAGCTCCAGTTTATGAGAAGGTTGCAGGGGTAGGAAGTGCAGTGAAGTCCAAAGTGACTGGAACTAGCACGGGTGGTGTTGGAACTGAGACAAAAGATGTGGTTAAAGAACAGGACCAGGACAAAGGGGTTTCTGTGAAGGACTATTTGGCTGAGAAGCTAAGGCCTGGAGAAGAAGACAAGGCACTTTCTGAGGTAATTTCAGAAGCTTTGCATAAGCGGAAGGAAGTGCCAGTGGAAAAAGAGGATGGAAACATGGATGGTGGGGATGAGAAAATGTGTGAAGAGAGCAGTGTGAACAGTCCAGGGAAAGGTGTAGTTGACAAGCTTAAGGGTGTTGTTGGCACTTGGTTTGGCAAATCTGAGGAAAAAGTTGCAGGAGGTGAAGATTTATCCAAAAATACAAATTCTGGTGCAGAAGTGGAACGGGTTAACCAGGTTGGTGGTGAAATCAAGAGTAGTCCAATTGAAGGACAAGGGACTCGCTAA 1626 0.4416 MDSRVVQNQVNENDEHYPHLDASQQVTHGEEELHFDREKKSVLNKAKAKAKKIKDTIKKHGRQVLDRGSECNNEDQHTLDDHDLDEDEDTHEDPQVHETPVHESEDVKTTTPTSEQVENLGKSGIDFGGTTGTTVMGEEPRHDALLGDVSSTTEIDQNTATEPAKTFSVEERAGLPKDNLERSIGLDLEEEPHATGSRPEAYTPPNYHTKVTDPSGVGKDEIEITPVEESFARMNVHDEPKPTPEINVQPTFVDPARSHDQFVPHLSAAAQTQYPSAERHDQFNQETISTNMNRNPAESGLSFNTITTTVEEQPLYEVNTDKVVSPKDVIAFEVGSGENDDIKDKVVTNEEQQKSGDASNMSGSTAQYGKNIAHSLTQKLAPVYEKVAGVGSAVKSKVTGTSTGGVGTETKDVVKEQDQDKGVSVKDYLAEKLRPGEEDKALSEVISEALHKRKEVPVEKEDGNMDGGDEKMCEESSVNSPGKGVVDKLKGVVGTWFGKSEEKVAGGEDLSKNTNSGAEVERVNQVGGEIKSSPIEGQGTR 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0776 541 MobiDBLite consensus disorder prediction 171 196 - -
Ssu7g0776 541 MobiDBLite consensus disorder prediction 454 485 - -
Ssu7g0776 541 MobiDBLite consensus disorder prediction 59 79 - -
Ssu7g0776 541 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 1 534 IPR037491 GO:0009737
Ssu7g0776 541 MobiDBLite consensus disorder prediction 150 165 - -
Ssu7g0776 541 MobiDBLite consensus disorder prediction 501 541 - -
Ssu7g0776 541 MobiDBLite consensus disorder prediction 110 130 - -
Ssu7g0776 541 MobiDBLite consensus disorder prediction 396 421 - -
Ssu7g0776 541 MobiDBLite consensus disorder prediction 454 473 - -
Ssu7g0776 541 MobiDBLite consensus disorder prediction 44 58 - -
Ssu7g0776 541 PANTHER - 1 534 - -
Ssu7g0776 541 MobiDBLite consensus disorder prediction 352 366 - -
Ssu7g0776 541 Coils Coil 43 63 - -
Ssu7g0776 541 MobiDBLite consensus disorder prediction 335 366 - -
Ssu7g0776 541 MobiDBLite consensus disorder prediction 1 219 - -
Ssu7g0776 541 MobiDBLite consensus disorder prediction 14 43 - -
Ssu7g0776 541 MobiDBLite consensus disorder prediction 337 351 - -
Ssu7g0776 541 MobiDBLite consensus disorder prediction 93 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0776 Ssu-Chr7 15643349 15646089 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0776 - - gmx:100791989 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0776 7 15643349 15646089 Ssu7g0776 7 15643349 15646089 ECH