Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0771 ATGGTTAAGGCAACTATAGTTGGAAGGGTACGCGATGGATTGCCTCTAGCACAAGGACTGAGATATATGAATGAAGAGAATGGACATCTTTCATCTTACAGGCAACAAGCAGAGTTCATACTCCAAGAAATTTCAAGGGGAGCATTGACAGCTTCCAAGATGACTATTCATATTGATCATTTCTGCTTCAACTACTTGGTCGAGAACGGAGTTGTTTTCGTTGTCTTGTGTGAGTCCACATACCCAAGAAAACTGGCATTCCATTACCTACAAGATATACAAAAGGAGTTTGAGAAGTTTGATAAAACCCTCATAGGCAAAATTGCAAGGCCATACAGCTTTGTCAAATTTGATGGTGTAATTGCAAACTTTAGTAGACAATACATTGATACAAGAACTCAGGCCAACCTATCAAAACTTAATGCTAACCGGAAACAAGATCTAGATATTGTCACCGAAGACATTTACAACATTttagaaaggaagagaaattcAGAAACAATGAGAAGGTTACCACTTACTCCTCAACCTGAATCCTCAATATGGTGTTCCCCACGCCTCGAGGTGATTGCGTTGAAATGGACACCTATTATGATCATTGTAGTTACTTCGATGGCTCTTCTATGGGCTGGCTTAGCCCTCACAGTCACAGATGACTTTATTATTTCAAGCTGGTGA 678 0.3894 MVKATIVGRVRDGLPLAQGLRYMNEENGHLSSYRQQAEFILQEISRGALTASKMTIHIDHFCFNYLVENGVVFVVLCESTYPRKLAFHYLQDIQKEFEKFDKTLIGKIARPYSFVKFDGVIANFSRQYIDTRTQANLSKLNANRKQDLDIVTEDIYNILERKRNSETMRRLPLTPQPESSIWCSPRLEVIALKWTPIMIIVVTSMALLWAGLALTVTDDFIISSW 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0771 225 PANTHER VESICLE-TRAFFICKING PROTEIN SEC22B 1 223 IPR044565 GO:0005484|GO:0006888|GO:0006890
Ssu7g0771 225 Pfam Regulated-SNARE-like domain 37 118 IPR010908 -
Ssu7g0771 225 Gene3D Longin domain 1 159 - -
Ssu7g0771 225 PANTHER SNARE-LIKE SUPERFAMILY PROTEIN 1 223 - -
Ssu7g0771 225 SUPERFAMILY SNARE-like 1 128 IPR011012 -
Ssu7g0771 225 CDD Longin 3 128 IPR010908 -
Ssu7g0771 225 SMART Longin_2 36 120 IPR010908 -
Ssu7g0771 225 ProSiteProfiles Longin domain profile. 6 121 IPR010908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0771 Ssu-Chr7 15546961 15548410 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0771 K08517 - gmx:100781527 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0771 7 15546961 15548410 Ssu7g0771 7 15546961 15548410 ECH