Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0769 ATGGTGTCGTCGCAGGTGGTGAATACATACCCGTTGTCGAGCTACACGTTCGGCACGAAGGAGCCCAAGATGGAGAAGGACACCTCCGTCGCCGATCGTCTCGCTCGCATGAAAGTCAACTATATGAAGGAAGGAATGAGGACCAGTGTCGAAGGAATTTTACTGGTACAAGAACACAATCATCCTCATATACTTCTTCTGCAAATTGGAAACACATTCTGCAAACTCCCAGGTGGTCGTCTCAAACCAGGAGAAAATGAAATTGAGGGCTTGAAGAGAAAGTTGACTAGTAAGCTTGGTGCTAATTCACCAGCTCTTGTGCCTGACTGGCAGATAGGTGAGTGTGTTGCAATCTGGTGGAGGCCAAATTTTGAAACCATAATGTATCCATACTGCCCTCCTCATATAACAAAACCCAAGGAGTGCAAAAAGCTTTTCCTTGTTCATTTATCTGAGAGGGAATACTTTGCAGTgcccaaaaatttaaaactacttGCTGTTCCATTGTTTGAACTCTATGACAATGTTCAGGTTGCCAATATTGGAGTGGAAAGGGTAAAGAAATGGACATTGGTTTTCATTGCAAGTTTTCCTGGTGAAGGGAATTGA 609 0.4269 MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQVANIGVERVKKWTLVFIASFPGEGN 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0769 202 PIRSF CPSF-25 1 185 IPR016706 GO:0003729|GO:0005849|GO:0006378
Ssu7g0769 202 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 188 - -
Ssu7g0769 202 ProSiteProfiles Nudix hydrolase domain profile. 46 171 IPR000086 -
Ssu7g0769 202 PANTHER PRE-MRNA CLEAVAGE FACTOR IM 25 KDA SUBUNIT 2-LIKE 1 182 - -
Ssu7g0769 202 PANTHER PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT 1 182 IPR016706 GO:0003729|GO:0005849|GO:0006378
Ssu7g0769 202 Pfam Nucleotide hydrolase 6 181 IPR016706 GO:0003729|GO:0005849|GO:0006378
Ssu7g0769 202 SUPERFAMILY Nudix 53 152 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0769 Ssu-Chr7 15516813 15520801 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0769 K14397 - gmx:100790200 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0769 7 15516813 15520801 Ssu7g0769 7 15516813 15520801 ECH