Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0748 ATGGGGGCTGGTGTTTCTTCAACTAATAAAGCAGAAAAGGAAGGAGGGTCTATTTCTCCATCATCAAGACCCGGTCTTGGTGATATCCCAGAGAGTTGCATCTCCTCCTTGCTCATGAATCTTGATCCACCCGATATATGCAAATTGGCCACAGTGAATAGGGCTTTTCACCGAGCTTCCTCAGCTGATTTTGTATGGGAATCAAAGTTGCCACAAAGTTACAAGTTTCTTGCCAGTAAAGTTCTTGGTGAAGAAAATATTGCTACTATGACTAAGAAAGAGATTTATGCAAAACTTTGCCTACCCAATCGTTTTGATGGTGGTACCAAAGAAGTTTGGTTGGACAAATGTAGTGGACAAGTTTGTTTGCTCATGTCATCCAAGTCCTTGAAGATTACAGGAATAGATGATAGAAGATACTGGAATTATATTCCAACGGAAGAATCCAGGTTCAATAGTGTTGCATATCTTCAACAAATGTGGTCGGTTGAAGTGGTAGGCGAGCTAGAGTTTGAATTCCCTGTGGGTAGTTACAGCTTTGTTTTCAGACTCCAGTTGGGCAAGGCCTCCAAGAGATTGGGCCGGCGCGTGTGCAACGCTGATCAAGTCCATGGCTGGGACATCAAGCCCGTCCGATTCCAACTCTCCACATCTGATGGCCAGCGTTCACTCTCGGAGTGTTACTTGCGTGGGCCTGGGGAGTGGGTCTACTACCATGTCGGAGATTTCGTGGTCGAAAAGCCCAATACGCCAACAAATATCAAGTTTTCCTTGGCCCAAATAGATTGTACTCACACCAAAGGTGGCCTCTGCGTAGATAGTGCCATCATTTGCCCAACGGAGTTTAGAGAAAGACTCAAAGAAAGTTAG 870 0.4506 MGAGVSSTNKAEKEGGSISPSSRPGLGDIPESCISSLLMNLDPPDICKLATVNRAFHRASSADFVWESKLPQSYKFLASKVLGEENIATMTKKEIYAKLCLPNRFDGGTKEVWLDKCSGQVCLLMSSKSLKITGIDDRRYWNYIPTEESRFNSVAYLQQMWSVEVVGELEFEFPVGSYSFVFRLQLGKASKRLGRRVCNADQVHGWDIKPVRFQLSTSDGQRSLSECYLRGPGEWVYYHVGDFVVEKPNTPTNIKFSLAQIDCTHTKGGLCVDSAIICPTEFRERLKES 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0748 289 MobiDBLite consensus disorder prediction 1 27 - -
Ssu7g0748 289 PANTHER F-BOX PROTEIN 1 288 - -
Ssu7g0748 289 Pfam Phloem protein 2 121 279 IPR025886 -
Ssu7g0748 289 ProSiteProfiles F-box domain profile. 23 69 IPR001810 GO:0005515
Ssu7g0748 289 SUPERFAMILY F-box domain 18 85 IPR036047 GO:0005515
Ssu7g0748 289 PANTHER F-BOX PROTEIN PP2-A15 1 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0748 Ssu-Chr7 15053798 15057814 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0748 - - gmx:100782620 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0748 7 15053798 15057814 Ssu7g0748 7 15053798 15057814 ECH
Ssu7g0748 7 15053798 15057814 Ssu7g0748 7 15053798 15057814 PCT