Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0735 ATGTCGTTGAATCCAACTTCCCCCGAGGCAAACGGCAAAATACAACATAACATGGGTTCCTCTGCTGCAACAAAAACCATAGCAGATTCAGCATCGTGGTGCTGTGCCATGGTGTTGTTGGCCATGATACTGTTGGGGTCAATAAGGGAAAGCACCATGGCAGATGAAGGTGAGGCCGTGAAAGGGAACAATCTTCGTGAAAGGCCGTGTGATGAAATATACGTGGTGGGAGAAGGGGAGACCCTGCACACCATCAGTGACAAGTGCAATGACCCGTTTATCGTGGAGCGGAACCCGCATATCCATGACCCGGATGATGTTTTCCCTGGCCTTGTCATCAAAATCACACCCACCAATACTAGGAAATTGTTGAAGAGGTAG 381 0.4908 MSLNPTSPEANGKIQHNMGSSAATKTIADSASWCCAMVLLAMILLGSIRESTMADEGEAVKGNNLRERPCDEIYVVGEGETLHTISDKCNDPFIVERNPHIHDPDDVFPGLVIKITPTNTRKLLKR 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0735 126 PANTHER EMBRYO SAC 1 20 125 - -
Ssu7g0735 126 CDD LysM 73 115 IPR018392 -
Ssu7g0735 126 Pfam LysM domain 74 115 IPR018392 -
Ssu7g0735 126 PANTHER LYSM DOMAIN-CONTAINING PROTEIN, PUTATIVE-RELATED 20 125 - -
Ssu7g0735 126 Gene3D LysM domain 66 123 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0735 Ssu-Chr7 14788977 14789469 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0735 - - gmx:100500035 179.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0735 7 14788977 14789469 Ssu7g0735 7 14788977 14789469 ECH