Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0733 ATGGGGTGGGTGTACGAGCAATTTATATGGGCATTTCTTGTTGGGTGCACGTTTCTTAGTGTATTATCTTATCCTGATGAAGCTCCAAAGTACCCATTTGTAAGAGAAGCAACTTCTGCTCCACCAATCTTATCTTATGACTACATAGTCATTGGTGGAGGGACATGTGGGTGTCCCCTAGCAGCATCTCTCTCACAAGGTGCAAgagttttagtccttgaaaggGGAGGCTCTCCTTACACAAACCCTGAGCAAATCAACATAAAGAACTTTGTCAATTCCCTCTCTGACATAAGCCCTTCATCATTTTCCCAGCAATTCATATCAAGAGATGGGGTCCTCAATGCCCGGGCTCGTGTCCTGGGTGGTGGCTCTGTCTTGAATGCAGGGTTCTATTCCCGGGCTAGCTCCAGGTACATAAGGGAATCAGGTTGGAATGAAACTTTGGCTAAGGACTCATATGAATGGGTTGAAAAGAAGGTGGCCTTTGAGCCCCCAATGCTGCAGTGGCAATCAGCAGTGAGGGATGGGTTGCTGGAAGCAGGTGTGTTGCCTTACAATGGTTTTACTTTTGATCACTTATATGGGACTAAGGTTGGAGGGACAATTTTTGATAATGAGGGTAACAGGCACACCGCAGCTGATTTGTTAGAGCATGCTGATCCCAAGAGGATTTCTGTTTATCTGTATGCCACAGTGCAGAAGATACTATTTAAGTATAACTCAGCTTATGGAATAATTTTCAAGGATGCATTTGGAGTCATGCATAGAGCATACTTAAGCACAAAGCCAAAGAATGAGATAATCTTGTCAGCTGGTGCAATTGGAAGCCCACAGTTGCTGATGCTGAGTGGGATTGGACCTGCTAACCATCTTCAGGCTCATGGAATCAAAGTGGTTTTGGATCAGCCCTTGGTGGGTCAAGGGATGGCAGATAATCCAATGAACGTTCTAGTTGTGCCTTCCCCTGTGCCTGTTGAAGTCTCTCTGATCCAAACAGTGGGCATCACTAAGTTTGGTGGCTTCATTGAAACAGCCAGTGGATTGAGCTTGGGCCATTCTTGGTCTGAAAGGCTTCAAGGGATTTTTGAATTTGCGTCAAATCAGTCTGGCCAGCCTTCCACGTTTCCCCCAGAAGCCGAGGAAAGTGTTGCAGACACCATTAGATCTTTAGCCAATCCGACTCTTAAAGGAGGAGTCATACTTGAAAAGATCATAGGACCACGCTCTACGGGTCATTTGGAGCTCATAACCACAAATCCCAGTGATAACCCATCAgttacctttaattattttcaggATCCAGAAGACTTAAGGATGTGTGTTGAAGGCATGAAAACCATCATAGATGTGATCAActcaaaatcattctcaaagtTCCGCTACCCCAACATGCCGGTCCAAGCTCTAATAGATTTGATGTTGCACTTACCAGTGAACCTGAGGCCAAAACATGCTAATGCTGCCTTTTCTTTGGAACAGTATTGCATAGACACTGTGCTAACAATTTGGCATTACCATGGGGGGTGCAAATCTGGCAAGGTTGTTGATCATAATTATAAGGTTATTGGTGTGGAAGCTCTGAGGGTAGTTGATGGATCCACTTTTTATCGCTCACCGGGGACTAATCCTCAAGCTACTGTAATGATGCTTGGAAGGTATATGGGAGAAAAGATTGTAAAGAGAAGATTCTTCCGTGGGCGGAAGTGA 1710 0.4357 MGWVYEQFIWAFLVGCTFLSVLSYPDEAPKYPFVREATSAPPILSYDYIVIGGGTCGCPLAASLSQGARVLVLERGGSPYTNPEQINIKNFVNSLSDISPSSFSQQFISRDGVLNARARVLGGGSVLNAGFYSRASSRYIRESGWNETLAKDSYEWVEKKVAFEPPMLQWQSAVRDGLLEAGVLPYNGFTFDHLYGTKVGGTIFDNEGNRHTAADLLEHADPKRISVYLYATVQKILFKYNSAYGIIFKDAFGVMHRAYLSTKPKNEIILSAGAIGSPQLLMLSGIGPANHLQAHGIKVVLDQPLVGQGMADNPMNVLVVPSPVPVEVSLIQTVGITKFGGFIETASGLSLGHSWSERLQGIFEFASNQSGQPSTFPPEAEESVADTIRSLANPTLKGGVILEKIIGPRSTGHLELITTNPSDNPSVTFNYFQDPEDLRMCVEGMKTIIDVINSKSFSKFRYPNMPVQALIDLMLHLPVNLRPKHANAAFSLEQYCIDTVLTIWHYHGGCKSGKVVDHNYKVIGVEALRVVDGSTFYRSPGTNPQATVMMLGRYMGEKIVKRRFFRGRK 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0733 569 Gene3D - 46 552 IPR036188 -
Ssu7g0733 569 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 3 563 - -
Ssu7g0733 569 Pfam GMC oxidoreductase 46 314 IPR000172 GO:0016614|GO:0050660
Ssu7g0733 569 Gene3D - 163 502 - -
Ssu7g0733 569 SUPERFAMILY FAD-linked reductases, C-terminal domain 310 509 - -
Ssu7g0733 569 Pfam GMC oxidoreductase 408 553 IPR007867 GO:0016614
Ssu7g0733 569 SUPERFAMILY FAD/NAD(P)-binding domain 44 563 IPR036188 -
Ssu7g0733 569 ProSitePatterns GMC oxidoreductases signature 2. 273 287 IPR000172 GO:0016614|GO:0050660
Ssu7g0733 569 PANTHER OSJNBA0019K04.7 PROTEIN 3 563 - -
Ssu7g0733 569 PIRSF Alcohol_oxidase 32 567 IPR012132 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0733 Ssu-Chr7 14750784 14754921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0733 3 563 Miscellaneous Gene Families AT5G51950 60.140 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0733 - - gmx:100780453 1020.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0733 7 14750784 14754921 Ssu7g0733 7 14750784 14754921 ECH