Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0727 ATGGCCTCtcatcaaaccaaaaagaatctTCAGATTACCCGCCTCCGAGACTTGGATCTCTTCACGGTCCAGAATTTTTTCACCTCTGCTGAATCAAAGTCGTTCATTAAAACTGCTGAGGCAATTGGTTTTGCTCATCAAGGGAGTCTAGGTCCAACTAAAGGCGAAGCTTACAGAGATAATGATCGAATCGCAGTGAATGATCCTGTCCTTGCAGATACTATTTGGGAGTCTGGACTTAGCAAACTATTTTCTGATATAAAAATTCGAGGAAAGGTTGCTGTTGGTCTGAATCCAAATATTAGATTCTATAGGTACAAGGTTGGTCAACGCTTTGGACGGCATATTGATGAAAGTGCTAATCTTGGAGATGGAAAACGCACTTATTATACCCTGCTAGTGTATTTGAGTGGTGGGCCTGGTGAACTTaaatcaaagaacaaaaatgaTTCCGGCAATCGCTCAGTTTCGTCTTTTGATCCTTTAGTTGGAGGAGAAACAGTCTTTTATGGTCCAAGAAATAACACTGTGGCTGAGGTGGCTCCTACTGAAGGAACAGGACTCCTGCACCTTCATGGAGATAAATGTTTGTTGCATGAAGCCAGAAATGTTACCAAGGGTGTCAAGTATGTGTTTCGTTCGGATGTAGTATTTGCTTGA 660 0.4015 MASHQTKKNLQITRLRDLDLFTVQNFFTSAESKSFIKTAEAIGFAHQGSLGPTKGEAYRDNDRIAVNDPVLADTIWESGLSKLFSDIKIRGKVAVGLNPNIRFYRYKVGQRFGRHIDESANLGDGKRTYYTLLVYLSGGPGELKSKNKNDSGNRSVSSFDPLVGGETVFYGPRNNTVAEVAPTEGTGLLHLHGDKCLLHEARNVTKGVKYVFRSDVVFA 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0727 219 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 6 219 IPR045054 -
Ssu7g0727 219 SMART p4hc 18 217 IPR006620 GO:0005506|GO:0016705|GO:0031418
Ssu7g0727 219 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 96 219 IPR005123 -
Ssu7g0727 219 Gene3D q2cbj1_9rhob like domain 5 214 - -
Ssu7g0727 219 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 6 219 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0727 - - vun:114191541 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0727 7 14679305 14680758 Ssu7g0727 7 14679305 14680758 ECH