Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0723 ATGGCCCAGTTTACCTCCTCAGGTAAATCAGACAATCTAACAAAAGAAAGCTACAAGGAAAAAAGTGCACTGGTTGTTTGCTTTGGTGAAATGTTAATAGACTTTGTGCCAACAGTGGGTGGAGTGTCACTAGCTGAAGCACCTGCTTTCAAGAAAGCTCCTGGTGGTGCTCCTGCCAATGTGGCTGTTGGCATCTCTAGGCTCGGGGGTTCATCTGCTTTTATGGGCAAGGTTGGCGCAGATGAATTTGGGTATATGTTGGCTGATATTTTAAAGCAGAACAATGTTGAGATATCTGGCATAAAGTTTGACCCTAATGCAAGAACTGCGTTAGCTTTTGTTACACTTAGAGCCGATGGCGAGCGTGAGTTCTTGTTTTTCCGAAATCCTAGTGCTGATATGCTTCTTCAAGAGTCAGAGCTTGATAGAAATCTCATAGAGAAGGCTAAAATATTCCATTATGGTTCCATCAGCTTGATTAATGAGCCGTGCAAGTCAGCTCATCTTGCTGCTCTGAGAATTGCTAAAGAATCTGGTTGCATTCTCTCATATGATCCGAATTTGAGATTGGCACTGTGGCCATCAGCTGAGGCTGCTCGGAATGGCATAAAGAGTATATGGGATCAAGCTGATGTCATAAAGATCAGTGAGGACGAGATAACATTTTTGACTGGTGGTGATGATCCTTATGAtgataatgttgtattaaagaAGCTTTTTCACCCTAATCTCAAGCTTTTAATTGTTACCGAAGGGTCAGAAGGTTGTAGATATTACACCAGGGAATTTAGGGGCAGGGTTGCAGGTGTTAAAGTCAAACCTGTTGACACAACCGGTGCTGGTGATGCATTTGTTAGTGGGATTATCTATAGCTTGGCTTGTGACCAAAGTCTTTTCCAGAATGAGGAGCGTCTCCGAAAAGCTCTATATTTTGCCAATGTATGTGGTGCCATCACGGTAACAGAGAGAGGGGCAATTCCTGCACTACCTACAAAAGAAGCTGTCCTGCAATTCGCTGCAACATGA 1026 0.4279 MAQFTSSGKSDNLTKESYKEKSALVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFMGKVGADEFGYMLADILKQNNVEISGIKFDPNARTALAFVTLRADGEREFLFFRNPSADMLLQESELDRNLIEKAKIFHYGSISLINEPCKSAHLAALRIAKESGCILSYDPNLRLALWPSAEAARNGIKSIWDQADVIKISEDEITFLTGGDDPYDDNVVLKKLFHPNLKLLIVTEGSEGCRYYTREFRGRVAGVKVKPVDTTGAGDAFVSGIIYSLACDQSLFQNEERLRKALYFANVCGAITVTERGAIPALPTKEAVLQFAAT 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0723 341 Pfam pfkB family carbohydrate kinase 23 331 IPR011611 -
Ssu7g0723 341 CDD bac_FRK 24 326 - -
Ssu7g0723 341 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016773
Ssu7g0723 341 SUPERFAMILY Ribokinase-like 25 338 IPR029056 -
Ssu7g0723 341 PANTHER FRUCTOKINASE-7-RELATED 16 339 - -
Ssu7g0723 341 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Ssu7g0723 341 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Ssu7g0723 341 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
Ssu7g0723 341 PANTHER HEXOKINASE FAMILY MEMBER 16 339 - -
Ssu7g0723 341 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016773
Ssu7g0723 341 Gene3D - 21 341 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0723 Ssu-Chr7 14596006 14599585 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0723 K00847 - gmx:100818404 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0723 7 14596006 14599585 Ssu7g0723 7 14596006 14599585 ECH
Ssu7g0723 7 14596006 14599585 Ssu7g0723 7 14596006 14599585 PCT