Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu7g0702 | ATGATCAAAcaggttcttcttcttcttctgctcTTCGCGGCTTCTGGATTGACCCTATCAGTTTCAGAGTCCCAATCTGCTTCTCTTCTGCCTCATGCGGCTGAGTCCTTCAATGTCAGCTATATCCAGCTGAAGAACGAGGGGAGTTGTTCTTACTTGACGGTTATATCTACTAGTTGTTCGTCTCCTAAATATACAAGGGATCAAATCAGTATTGCTTTTGGGGATGCTTATGGCAACCAGATATATGCACCAAGACTGGATGATCCAACCTCAGGTACATTTGAGAGCTGCTCTTCAGATACATTTCAGATAAATGGTCCGTGTGCatatcaaatatgttatgtGTACCTATATAGATCTGGATCAGATGGTTGGAAGCCTGAAAGTGTGAAAATCAATAGTTATAACGGCAGGCCTGTTACTTTCTATTACAACACATATATCCCCAAAGATACGTGGTATGGATTTAATTTGTGCAAcagtgcttcttcttcttcgtacCAGGTATCTATGCAGAAATGgcttatatttttggttctggGATTTGTTCTTAGTATTTGGTTGTAA | 570 | 0.3491 | MIKQVLLLLLLFAASGLTLSVSESQSASLLPHAAESFNVSYIQLKNEGSCSYLTVISTSCSSPKYTRDQISIAFGDAYGNQIYAPRLDDPTSGTFESCSSDTFQINGPCAYQICYVYLYRSGSDGWKPESVKINSYNGRPVTFYYNTYIPKDTWYGFNLCNSASSSSYQVSMQKWLIFLVLGFVLSIWL | 189 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu7g0702 | 189 | CDD | PLAT | 50 | 161 | - | - | |
| Ssu7g0702 | 189 | Pfam | Embryo-specific protein 3, (ATS3) | 42 | 160 | IPR010417 | - | |
| Ssu7g0702 | 189 | Gene3D | PLAT/LH2 domain | 45 | 157 | - | - | |
| Ssu7g0702 | 189 | PANTHER | - | 6 | 189 | - | - | |
| Ssu7g0702 | 189 | PANTHER | EMBRYO-SPECIFIC PROTEIN | 6 | 189 | - | - | |
| Ssu7g0702 | 189 | SUPERFAMILY | Lipase/lipooxygenase domain (PLAT/LH2 domain) | 48 | 157 | IPR036392 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu7g0702 | Ssu-Chr7 | 14236756 | 14238702 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu7g0702 | - | - | gmx:100499692 | 343.584 |
Event-related genes