Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0701 atgCTTTCCAAATCAGTTCACCCCTCAGCGGAACCCCAACCCAAAACAGTCATCGCCAAAACCTCCCTCCTCCTCCAACTCCGCCTCTCCCCCCAAAACCCTCGCACATGGATCCTCCTCACCGTCCTCTTCATCCAGATCCTCCTCCTCTGCAACCTCCGTAGCTTCCCCTCCTCAATTCCCTCCCCCCTCGCCGCCGCCGTCGTCGTCCACCGCTCCTCCGGCACCCTCGACCAATGCGGCTCCGGCAAGGTCTTCGTCTACGACCTCCCCGCAACCTTCAACCGCCAAATCCTCCTCAATTGCGACAACCTCAACCCCTGGAGCTCCCGCTGCGACGCTCTCTCCAACGACGGCTTCGGCCGCCGCGCCGCCGCCCTCGCCGGAATCGTCCCCGACGATCTCCTCCCCGCGTGGCACTGGACCGACCAGTTCGTCACCGAAATCATCTTCCACAACCGCTTAATCAACCACAGGTGCAGGGTCATGGAGCCGGAATCCGCTACGGCGTTCTACATCCCCTTCTACGCTGGACTCGCGGTCGGGAAGTACCTCTGGTTCAACTCCACCGCGGACGATCGCGATCGCCACTGCGACATGATGCTGCGCTGGGTCCAGGACCAACCGTACTTCAAAAGATCCAACGGTTGGGACCATTTTATTACCATGGGCCGCATCACGTGGGATTTTCGCCGCTCGATAGACGAGGACTGGGGTTCTAGCTGCATCTACGAGCCAGAGATGAGAAACGTCACGCGCCTTCTCATCGAGCGTAACCCTTGGGACTATTTCGACGTCGGTGTTCCCTACCCCACCGGATTCCACCCCCACTCCAAATCCGACGTCACGCGCTGGCAGAGCTTCGTCAGCGGGCGCCGCCGCCGCGCGCTCTTCTGCTTCGCCGGCGCGCCGCGCCGCGGGTTCCGCGACGACTTCCGCGGGATCCTGCTGAGTCAGTGCCGCGACTCGGGCGAGTCGTGCCGGGAGGTTAACTGCGCCGGGACGCGGTGCTCGAACGGCACGTCGGCGATTTTGGAAACTTTTCTCGACTCGGACTTCTGCTTGCAGCCGAGGGGGGACAGCTTCACGCGCCGGTCGATTTTCGATTGCATGGTGGCCGGTTCGATTCCGGTTTTTTTCTGGCGGCGAACCGCGTACTTGCAGTACGAGTGGTTCTTGCCGGGTGAGCCGGAGAGTTACTCGGTTTACATAGATCGGAACGCGGTGAAGAATGGAACCTTAACCGTGAAAACCGTGCTTGAGGGGTTTAGCAAGGAGGAAGTGAGGAAAATGAGGGAGAAAGTGATTGAGTACATTCCGAGGTTGGTTTACGCAAACACGAAACAAGGGTTAGAGGGTGTGAAGGATGCTTTCGATGTAGCCATCGAAGGAGTGTTCGCAAGGATTAAGGAACAGGAACAACCGGAGTTTCATAAGTGGAAATAA 1446 0.5913 MLSKSVHPSAEPQPKTVIAKTSLLLQLRLSPQNPRTWILLTVLFIQILLLCNLRSFPSSIPSPLAAAVVVHRSSGTLDQCGSGKVFVYDLPATFNRQILLNCDNLNPWSSRCDALSNDGFGRRAAALAGIVPDDLLPAWHWTDQFVTEIIFHNRLINHRCRVMEPESATAFYIPFYAGLAVGKYLWFNSTADDRDRHCDMMLRWVQDQPYFKRSNGWDHFITMGRITWDFRRSIDEDWGSSCIYEPEMRNVTRLLIERNPWDYFDVGVPYPTGFHPHSKSDVTRWQSFVSGRRRRALFCFAGAPRRGFRDDFRGILLSQCRDSGESCREVNCAGTRCSNGTSAILETFLDSDFCLQPRGDSFTRRSIFDCMVAGSIPVFFWRRTAYLQYEWFLPGEPESYSVYIDRNAVKNGTLTVKTVLEGFSKEEVRKMREKVIEYIPRLVYANTKQGLEGVKDAFDVAIEGVFARIKEQEQPEFHKWK 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0701 481 Pfam Exostosin family 80 411 IPR040911 -
Ssu7g0701 481 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 15 474 IPR004263 GO:0006486|GO:0016757
Ssu7g0701 481 PANTHER XYLOGLUCAN GALACTOSYLTRANSFERASE XLT2 15 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0701 Ssu-Chr7 14184418 14185863 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0701 - - gsj:114403132 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0701 7 14184418 14185863 Ssu7g0701 7 14184418 14185863 ECH