Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0546 ATGATAAAACGGTTTCCAAGTAGGAACCATAGGTCCAAAGGCATCAAGGTAAAAcatgttttacaaattattcTGTTGCTTGGTGTTTGCTTCTGGTTGATCTACCAGGTTAAGCACAATCATGATAAGAAGAAGGAATTTGACAAGAAGGATGCAAAACTGTCAGTTGGTACACAGACAGATCAGATCCTGAAACTTGGTAGAAGAGACCTTCATCCAGGTAAGCCTGAAGAAAGTCAGAATGAAAAACatgaggaagaagaggaagatgaaCATattgaagaggatgaagaaaataaaCAGAACCATGAAGAACAAGAAGATAGAAGCAAGCATGAAACCAAAGAACATGAAGATAATAAGCATGAAGGCAGAGAACAAggggaagaagaaaataagcatGGAGCAGACAAACAGGAGgaagatgaaaacaaaaatgaagaagTGGAAGATgaaggaagaggaggaggagatgATGAGATAGATGAAAATGATCGAGAGAAATCAGAGGTGGATACTACTGATCGTGATGATGAGTTcttggaagaagagaaagagaaacagGAAGAGGTTGATGAGAAGGAGAACGAAAATGAGGATGAGGAAAAAGAGGGTTTAGTTGAAAACCACGAGAATCACGAGGCTCGGGAGGAACATTACAAGGGGGATGATGCTTCTAGTGCTGTGGCTCATGACACTCATGCAACTAGCACCGAAACCGAGACACTTAGCTTGGAAAACTCTGATGTAAACTTGGAAATGAATACCACAAAACCTGAAAACGAGTCAACATATTCAGATGAAAGTGTCAGGAATCGAAGTGATCCAGATTTAAAGGTTTCAGAAGGTGACGTGATAGACAGGATTTCTTCAAATGCAACTACTGAAGAGACTGGAAATAACACTTTGTCCAACTCTCTGGATGATAGCTCATATCTAAATAAAACAGTCACAACAAACTCTGACAACCACTTGGAATCAAGCAGTAACCTGACAGTAGTGACCACTGAAGCAAGCAATAACTTGACCGGAGCTGGTAACAACACTTCAGGTTCATctgaacaaaacaaaacagcgaTGTTATCTGAATCCGACCAAGCTCAAATTACCACGACAATCACAACAATCCCTGGAGATGTCAAAAATGTGCAAACAGAGGGATTAGAGCAGAGTGGCAATAAAATTTCTGAAGATAACCTGCATGATACTGATTCAACAGTCTCTCTTAAAACTGTTAATGGAGGTGCAGCTGCAGGAGAATCATCTAATCTAGTAGCTTCGAACGTAACCGAGAACACTTATAGAAATGAGAGGTCTGAATCTGATACCTCTGAAGGTGACAAGTCCAAAGGTAACACTGAAGCGAGTGAAACAAATGAAACCCAGAATGTTGATGCCACAGAGGATGAGATGTTCAAAGGTGACACTCGAATAGGTGAAACTGATGAAACATCAGACTCTATCTCTGCCAATGAAGCTTTGGATTCAGCTGAACAAGATGCCATCGATTCTTCTGATACTCATATCCACGAGGATGTGACCGAGGCTCGAACCGATCTTGATACGTTACCAAATATCAGAAACGAAGGAGATGATAGTGACGAAACTGTCGCAGAGTAA 1620 0.3673 MIKRFPSRNHRSKGIKVKHVLQIILLLGVCFWLIYQVKHNHDKKKEFDKKDAKLSVGTQTDQILKLGRRDLHPGKPEESQNEKHEEEEEDEHIEEDEENKQNHEEQEDRSKHETKEHEDNKHEGREQGEEENKHGADKQEEDENKNEEVEDEGRGGGDDEIDENDREKSEVDTTDRDDEFLEEEKEKQEEVDEKENENEDEEKEGLVENHENHEAREEHYKGDDASSAVAHDTHATSTETETLSLENSDVNLEMNTTKPENESTYSDESVRNRSDPDLKVSEGDVIDRISSNATTEETGNNTLSNSLDDSSYLNKTVTTNSDNHLESSSNLTVVTTEASNNLTGAGNNTSGSSEQNKTAMLSESDQAQITTTITTIPGDVKNVQTEGLEQSGNKISEDNLHDTDSTVSLKTVNGGAAAGESSNLVASNVTENTYRNERSESDTSEGDKSKGNTEASETNETQNVDATEDEMFKGDTRIGETDETSDSISANEALDSAEQDAIDSSDTHIHEDVTEARTDLDTLPNIRNEGDDSDETVAE 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0546 539 Coils Coil 177 216 - -
Ssu7g0546 539 MobiDBLite consensus disorder prediction 63 307 - -
Ssu7g0546 539 MobiDBLite consensus disorder prediction 264 284 - -
Ssu7g0546 539 MobiDBLite consensus disorder prediction 416 539 - -
Ssu7g0546 539 MobiDBLite consensus disorder prediction 176 202 - -
Ssu7g0546 539 MobiDBLite consensus disorder prediction 435 454 - -
Ssu7g0546 539 MobiDBLite consensus disorder prediction 466 482 - -
Ssu7g0546 539 MobiDBLite consensus disorder prediction 501 539 - -
Ssu7g0546 539 MobiDBLite consensus disorder prediction 96 142 - -
Ssu7g0546 539 MobiDBLite consensus disorder prediction 483 500 - -
Ssu7g0546 539 MobiDBLite consensus disorder prediction 416 434 - -
Ssu7g0546 539 MobiDBLite consensus disorder prediction 65 82 - -
Ssu7g0546 539 MobiDBLite consensus disorder prediction 159 175 - -
Ssu7g0546 539 MobiDBLite consensus disorder prediction 230 263 - -
Ssu7g0546 539 Coils Coil 86 120 - -
Ssu7g0546 539 MobiDBLite consensus disorder prediction 339 365 - -
Ssu7g0546 539 PANTHER MYB-LIKE PROTEIN X 1 538 - -
Ssu7g0546 539 PANTHER PROTEIN, PUTATIVE-RELATED 1 538 - -
Ssu7g0546 539 MobiDBLite consensus disorder prediction 287 307 - -
Ssu7g0546 539 MobiDBLite consensus disorder prediction 203 228 - -
Ssu7g0546 539 MobiDBLite consensus disorder prediction 143 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0546 Ssu-Chr7 10096706 10098325 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0546 - - gmx:100820291 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0546 7 10096706 10098325 Ssu7g0546 7 10096706 10098325 ECH
Ssu2g3136 2 93444197 93445765 Ssu7g0546 7 10096706 10098325 PCT